Microsatellites /Tandem Repeats database

Genome: Haemophilus influenzae R2846

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
31583ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCA-ATCADesign primers
54502TGAGCCTAAATT-TGAGCCTAAATT-TGAGCCTAAATTDesign primers
186516AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCADesign primers
196210AACGTCAGCAAGAACAGC-AACGTCAGCAAGAACAGC-AACGTCAGCAAGAACAGCDesign primers
220751TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAA-TCAADesign primers
225066CTAAAAATAAT-CTAAAAATAAT-CTAAAAATAATDesign primers
317951GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACA-GACADesign primers
414559TAATTCA-TAATTCA-TAATTCA-TAATTCA-TAATTCA-TAATTCA-TAATTCA-TAATTCADesign primers
420582TAAGCTCGCTGG-TAAGCTCGCTGG-TAAGCTCGCTGGDesign primers
581131ATATTGGTGTAACTCTGTAGG-ATATTGGTGTAACTCTGTAGG-ATATTGGTGTAACTCTGTAGGDesign primers
731236TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGT-TTGCTTGGTDesign primers
737977TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGA-TGAAAGADesign primers
774523ATTATTTG-ATTATTTG-ATTATTTG-ATTATTTGDesign primers
928888AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACCDesign primers
942013AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGAC-AGACDesign primers
984865TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGCDesign primers
1059258CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAATDesign primers
1122092ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTC-ATCTTTCDesign primers
1247741AATGA-AATGA-AATGA-AATGA-AATGA-AATGA-AATGADesign primers
1466188CCAAATAATTC-CCAAATAATTC-CCAAATAATTC-CCAAATAATTC-CCAAATAATTC-CCAAATAATTC-CCAAATAATTCDesign primers
1505818GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACT-GACTDesign primers
1633701TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGCDesign primers
1690006CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAADesign primers
1751418AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACCDesign primers
1809645AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACCDesign primers

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