This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 31581 | TTAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 54499 | ATCTGAGCCTAAATTTGAGCCTAAATTTGAGCCTAA | Design primers |
| 186515 | CAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 196209 | AAACGTCAGCAAGAACAG-CAACGTCAGCAAGAACAG-CAACGTCAGCAAGAACAG | Design primers |
| 220749 | TGTC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC-AATC | Design primers |
| 225065 | GCTAAAAATAA-TCTAAAAATAA-TCTAAAAATAA | Design primers |
| 317949 | ATGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA-CAGA | Design primers |
| 414554 | ATTATTA-ATTCATA-ATTCATA-ATTCATA-ATTCATA-ATTCATA-ATTCATA-ATTCATA-ATTCATA | Design primers |
| 420581 | ATAAGCTCGCTG-GTAAGCTCGCTG-GTAAGCTCGCTG | Design primers |
| 581129 | AAATATTGGTGTAACTCTGTA-GGATATTGGTGTAACTCTGTA-GGATATTGGTGTAACTCTGTA | Design primers |
| 731235 | ATTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG-TTTGCTTGG | Design primers |
| 737974 | ATGTGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA-AGATGAA | Design primers |
| 774523 | ATTATTTG-ATTATTTG-ATTATTTG-ATTATTTG | Design primers |
| 928887 | GAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC | Design primers |
| 942011 | TTAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG-ACAG | Design primers |
| 984863 | CATT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 1059258 | CAAT-CAAT-CAAT-CAAT-CAAT-CAAT-CAAT | Design primers |
| 1122088 | TATAATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC-TTTCATC | Design primers |
| 1247740 | CAATG-AAATG-AAATG-AAATG-AAATG-AAATG | Design primers |
| 1397564 | ACTTCTACTGAAGAAACAACAGTAACTTCTACTGACAAAACAACAGTAACTTCTACTGACAAAACAACAGTA | Design primers |
| 1466183 | ACTTGCCAAAT-AATTCCCAAAT-AATTCCCAAAT-AATTCCCAAAT-AATTCCCAAAT-AATTCCCAAAT-AATTCCCAAAT-AATTCCCAAAT | Design primers |
| 1505816 | ACGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA | Design primers |
| 1633698 | TCTT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT | Design primers |
| 1690004 | GCCC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC-AACC | Design primers |
| 1751416 | AGAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA | Design primers |
| 1809643 | AGAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA-CCAA | Design primers |
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