Microsatellites /Tandem Repeats database

Genome: Pantoea ananatis PA13

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
653052CAAACC-CAAACC-CAAACC-CAAACC-CAAACC-CAAACC-CAAACCDesign primers
886086GCTCGGGAT-GCTCGGGAT-GCTCGGGAT-GCTCGGGAT-GCTCGGGATDesign primers
1137127CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGA-CTGADesign primers
1765123ACGCAGCC-ACGCAGCC-ACGCAGCC-ACGCAGCC-ACGCAGCCDesign primers
1866963GCATAACT-GCATAACT-GCATAACTDesign primers
1949077CCTAAA-CCTAAA-CCTAAA-CCTAAA-CCTAAADesign primers
2549986TGTACAACTT-TGTACAACTT-TGTACAACTT-TGTACAACTT-TGTACAACTT-TGTACAACTT-TGTACAACTTDesign primers
2756347CTGAACCG-CTGAACCG-CTGAACCG-CTGAACCGDesign primers
2797799TGGGGTT-TGGGGTT-TGGGGTT-TGGGGTTDesign primers
2844539AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGA-AACAGADesign primers
2891482CGTGATAAC-CGTGATAAC-CGTGATAAC-CGTGATAAC-CGTGATAACDesign primers
2955604GGCTTTCAG-GGCTTTCAG-GGCTTTCAG-GGCTTTCAG-GGCTTTCAG-GGCTTTCAG-GGCTTTCAGDesign primers
3155622GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCA-GAAGGCADesign primers
3277575TCTGCC-TCTGCC-TCTGCC-TCTGCC-TCTGCC-TCTGCCDesign primers
3298947CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAG-CAGGTAGDesign primers
3927359ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTT-ACGGTTDesign primers
4237182GAGGTT-GAGGTT-GAGGTT-GAGGTT-GAGGTTDesign primers
4556237GGTTTACA-GGTTTACA-GGTTTACA-GGTTTACA-GGTTTACA-GGTTTACA-GGTTTACADesign primers
4556294GCTTACAG-GCTTACAG-GCTTACAG-GCTTACAG-GCTTACAG-GCTTACAG-GCTTACAG-GCTTACAG-GCTTACAGDesign primers
4567763GCAATG-GCAATG-GCAATG-GCAATGDesign primers

Please help us improve this resource by reporting problems, suggestions etc.