This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 5135 | AAAAGAGAGTTTAA-AAAAGAGAGTTTAA-AAAAGAGAGTTTAA | Design primers |
| 70282 | TTAAAAAAAGAGAG-TTAAAAAAAGAGAG-TTAAAAAAAGAGAG-TTAAAAAAAGAGAG-TTAAAAAAAGAGAG | Design primers |
| 317131 | GATGGAGGC-GATGGAGGC-GATGGAGGC | Design primers |
| 334492 | TTTCTTGGG-TTTCTTGGG-TTTCTTGGG-TTTCTTGGG | Design primers |
| 346600 | AAAATAATCAAT-AAAATAATCAAT-AAAATAATCAAT-AAAATAATCAAT-AAAATAATCAAT | Design primers |
| 421909 | AAGAAGAAA-AAGAAGAAA-AAGAAGAAA | Design primers |
| 447526 | ATGGTTTTG-ATGGTTTTG-ATGGTTTTG | Design primers |
| 658942 | TAATTAACCCTCAAATCATCA-TAATTAACCCTCAAATCATCA-TAATTAACCCTCAAATCATCA-TAATTAACCCTCAAATCATCA-TAATTAACCCTCAAATCATCA-TAATTAACCCTCAAATCATCA | Design primers |
| 866968 | GTTTAATTCTGT-GTTTAATTCTGT-GTTTAATTCTGT | Design primers |
| 912811 | TTTAAAAACAAAGAA-TTTAAAAACAAAGAA-TTTAAAAACAAAGAA | Design primers |
| 912885 | AAAAAAAGAGAGTTT-AAAAAAAGAGAGTTT-AAAAAAAGAGAGTTT | Design primers |
| 934960 | TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG-TTTATTATG | Design primers |
| 1043664 | TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC-TTGTGTGGTTTGTTC | Design primers |
| 1067532 | AAGAATA-AAGAATA-AAGAATA-AAGAATA | Design primers |
| 1071337 | TTTTAGAGTTTGAAAAGAA-TTTTAGAGTTTGAAAAGAA-TTTTAGAGTTTGAAAAGAA | Design primers |
| 1071575 | CAATCATT-CAATCATT-CAATCATT-CAATCATT-CAATCATT-CAATCATT-CAATCATT-CAATCATT | Design primers |
| 1071651 | CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT-CATTCTAT | Design primers |
| 1071772 | ATTCAATC-ATTCAATC-ATTCAATC-ATTCAATC-ATTCAATC-ATTCAATC | Design primers |
| 1071835 | CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT | Design primers |
| 1071897 | ATCAAGCA-ATCAAGCA-ATCAAGCA-ATCAAGCA-ATCAAGCA-ATCAAGCA-ATCAAGCA | Design primers |
| 1072020 | TTATTCCCTCTT-TTATTCCCTCTT-TTATTCCCTCTT-TTATTCCCTCTT-TTATTCCCTCTT-TTATTCCCTCTT | Design primers |
| 1106649 | AAGAGTTATAAAG-AAGAGTTATAAAG-AAGAGTTATAAAG-AAGAGTTATAAAG-AAGAGTTATAAAG | Design primers |
| 1145557 | TTAAGGGGTTTAAAGAAT-TTAAGGGGTTTAAAGAAT-TTAAGGGGTTTAAAGAAT-TTAAGGGGTTTAAAGAAT | Design primers |
| 1201631 | AAAACTAAAAT-AAAACTAAAAT-AAAACTAAAAT-AAAACTAAAAT-AAAACTAAAAT-AAAACTAAAAT-AAAACTAAAAT-AAAACTAAAAT | Design primers |
| 1277918 | ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT-ATTTAAGT | Design primers |
| 1309624 | AAAACAAAGGGTTCA-AAAACAAAGGGTTCA-AAAACAAAGGGTTCA-AAAACAAAGGGTTCA-AAAACAAAGGGTTCA-AAAACAAAGGGTTCA-AAAACAAAGGGTTCA | Design primers |
| 1309972 | AAAACAAAGAGAGTTTAA-AAAACAAAGAGAGTTTAA-AAAACAAAGAGAGTTTAA-AAAACAAAGAGAGTTTAA | Design primers |
| 1312454 | AAGATTAAAC-AAGATTAAAC-AAGATTAAAC | Design primers |
| 1374713 | GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT-GTATTTAT | Design primers |
| 1392328 | AAACCC-AAACCC-AAACCC-AAACCC-AAACCC | Design primers |
| 1570646 | AAAAGAAT-AAAAGAAT-AAAAGAAT-AAAAGAAT | Design primers |
| 1576862 | AAAGGGTTAATA-AAAGGGTTAATA-AAAGGGTTAATA-AAAGGGTTAATA-AAAGGGTTAATA | Design primers |
| 1576923 | AAGAGGGAATAA-AAGAGGGAATAA-AAGAGGGAATAA-AAGAGGGAATAA | Design primers |
| 1577037 | TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA-TTGCTTGA | Design primers |
| 1577111 | GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT | Design primers |
| 1577167 | GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT | Design primers |
| 1577208 | AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG | Design primers |
| 1577351 | GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT | Design primers |
| 1577487 | GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT | Design primers |
| 1577708 | ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA | Design primers |
| 1577884 | TTTCAAACTCTAAAATTCT-TTTCAAACTCTAAAATTCT-TTTCAAACTCTAAAATTCT-TTTCAAACTCTAAAATTCT-TTTCAAACTCTAAAATTCT | Design primers |
| 1577998 | TTTCAAACTCTAAAATTCT-TTTCAAACTCTAAAATTCT-TTTCAAACTCTAAAATTCT | Design primers |
| 1581733 | AATCTTTTTTT-AATCTTTTTTT-AATCTTTTTTT-AATCTTTTTTT | Design primers |
| 1582158 | TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC-TTTATTC | Design primers |
| 1658251 | TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA-TTAGTGA | Design primers |
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