This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 5134 | TAAAAGAGAGTTTA-AAAAAGAGAGTTTA-AAAAAGAGAGTTTA | Design primers |
| 5234 | GTTTAAAAAAGAAAGG-GTTTAAAAAAGAAAGG-GCTTAAAAAAGAAAGG | Design primers |
| 70281 | ATTAAAAAAAGAGA-GTTAAAAAAAGAGA-GTTAAAAAAAGAGA-GTTAAAAAAAGAGA-GTTAAAAAAAGAGA | Design primers |
| 184005 | AAACCCAACCAAACCCCACCAATCCCAACC | Design primers |
| 317131 | GATGGAGGC-GATGGAGGC-GATGGAGGC | Design primers |
| 334492 | TTTCTTGGG-TTTCTTGGG-TTTCTTGGG-TTTCTTGGG | Design primers |
| 346599 | AAAAATAATCAA-TAAAATAATCAA-TAAAATAATCAA-TAAAATAATCAA-TAAAATAATCAA | Design primers |
| 421909 | AAGAAGAAA-AAGAAGAAA-AAGAAGAAA | Design primers |
| 447526 | ATGGTTTTG-ATGGTTTTG-ATGGTTTTG | Design primers |
| 628727 | TTTGCGCGATTTTTTGGGCGATTTTTTGCGCGCTTT | Design primers |
| 658937 | GATCGTAATTAACCCTCAAAT-CATCATAATTAACCCTCAAAT-CATCATAATTAACCCTCAAAT-CATCATAATTAACCCTCAAAT-CATCATAATTAACCCTCAAAT-CATCATAATTAACCCTCAAAT | Design primers |
| 866966 | GCGTTTAATTCTGTGTTTAATTCTGTGTTTAATTCT | Design primers |
| 912810 | GTTTAAAAACAAAGA-ATTTAAAAACAAAGA-ATTTAAAAACAAAGA | Design primers |
| 912880 | AGTTCAAAAAAAGAGAGTTTAAAAAAAGAGAGTTTAAAAAAAGAG | Design primers |
| 934959 | TTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT-GTTTATTAT | Design primers |
| 1043663 | ATTGTGTGGTTTGTT-CTTGTGTGGTTTGTT-CTTGTGTGGTTTGTT-CTTGTGTGGTTTGTT-CTTGTGTGGTTTGTT-CTTGTGTGGTTTGTT-CTTGTGTGGTTTGTT-CTTGTGTGGTTTGTT | Design primers |
| 1067532 | AAGAATA-AAGAATA-AAGAATA-AAGAATA | Design primers |
| 1071336 | TTTTTAGAGTTTGAAAAGA-ATTTTAGAGTTTGAAAAGA-ATTTTAGAGTTTGAAAAGA | Design primers |
| 1071574 | GCAATCAT-TCAATCAT-TCAATCAT-TCAATCAT-TCAATCAT-TCAATCAT-TCAATCAT-TCAATCAT | Design primers |
| 1071639 | CTAGCATTCTAGCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATTCTATCATT | Design primers |
| 1071761 | ATCATTCT-ATCATTCA-ATCATTCA-ATCATTCA-ATCATTCA-ATCATTCA | Design primers |
| 1071835 | CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT-CATTCAAT | Design primers |
| 1071895 | CTATCAAG-CAATCAAG-CAATCAAG-CAATCAAG-CAATCAAG-CAATCAAG | Design primers |
| 1072016 | TTTATTATTCCC-TCTTTTATTCCC-TCTTTTATTCCC-TCTTTTATTCCC-TCTTTTATTCCC-TCTTTTATTCCC | Design primers |
| 1106646 | AAAAAGAGTTATA-AAGAAGAGTTATA-AAGAAGAGTTATA-AAGAAGAGTTATA-AAGAAGAGTTATA | Design primers |
| 1145556 | CTTAAGGGGTTTAAAGAA-TTTAAGGGGTTTAAAGAA-TTTAAGGGGTTTAAAGAA-TTTAAGGGGTTTAAAGAA | Design primers |
| 1201629 | TAAAAACTAAA-ATAAAACTAAA-ATAAAACTAAA-ATAAAACTAAA-ATAAAACTAAA-ATAAAACTAAA-ATAAAACTAAA-ATAAAACTAAA | Design primers |
| 1208155 | ATTTTCCTAA-ATTTTCCTAA-ATTATCCTAA | Design primers |
| 1249846 | TTGTCTTTTGTTTTTCTTGTTCTGTCTTTTGTTGTTCTTGTTCTGTCTTTTGTTTTTCTTGTT | Design primers |
| 1249942 | TTGTCTTTTGTTTTTCTTGTT-CTGTCTTTTGTTTTTCTTGTT-CTGTCTTTTGTTGTTCTTGTT | Design primers |
| 1277916 | TAATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA-GTATTTAA | Design primers |
| 1309622 | CTAAAACAAAGGGTT-CAAAAACAAAGGGTT-CAAAAACAAAGGGTT-CAAAAACAAAGGGTT-CAAAAACAAAGGGTT-CAAAAACAAAGGGTT-CAAAAACAAAGGGTT | Design primers |
| 1309971 | CAAAACAAAGAGAGTTTA-AAAAACAAAGAGAGTTTA-AAAAACAAAGAGAGTTTA-AAAAACAAAGAGAGTTTA | Design primers |
| 1310059 | AAAAAAGGAGTTTC-AAAAAAGGAGTTTC-AAAAAAGGAGTTCC | Design primers |
| 1312453 | GAAGATTAAA-CAAGATTAAA-CAAGATTAAA-CAAGATTAAA | Design primers |
| 1374710 | TTAGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT-TATGTATT | Design primers |
| 1392326 | CAAAAC-CCAAAC-CCAAAC-CCAAAC-CCAAAC-CCAAAC | Design primers |
| 1570646 | AAAAGAAT-AAAAGAAT-AAAAGAAT-AAAAGAAT | Design primers |
| 1576792 | CGGGTTAATGAAAGGGTTAATAAA-AGGGTTAATGAAAGGGTTAATAAA-AGGGTTAATGAAAGGGTTAATGAA-AGGGTTAATAAAAGGGTTAATAAA-AGGGTTAATAAAAGGGTTAATAAA | Design primers |
| 1576917 | TAATAAAAGAGG-GAATAAAAGAGG-GAATAAAAGAGG-GAATAAAAGAGG | Design primers |
| 1577036 | GTTGCTTG-ATTGCTTG-ATTGCTTG-ATTGCTTG-ATTGCTTG-ATTGCTTG | Design primers |
| 1577103 | GAATGCTA-GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGATT-GAATGCTA-GAATGCTA-GAATGATT-GAATGATT-GAATGATT-GAATGATT | Design primers |
| 1577200 | AATGATTG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG-AATGATAG | Design primers |
| 1577349 | TAGAATGA-TTGAATGA-TTGAATGA-TTGAATGA-TTGAATGA-TTGAATGA | Design primers |
| 1577447 | GAATGCTA-GAATGATT-GAATGATT-GAATGCTA-GAATGCTA-GAATGATT-GAATGATT-GAATGATT-GAATGATT | Design primers |
| 1577707 | CATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA-AATTCTTTTCAAACTCTAA | Design primers |
| 1577879 | ATTCCTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCCTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA-ATTCTTTTCAAACTCTAAA | Design primers |
| 1581726 | TTTTTTCAATC-TTTTTTTAATC-TTTTTTTAATC-TTTTTTTAATC | Design primers |
| 1582156 | GTTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT-TCTTTAT | Design primers |
| 1658248 | TTTTTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG-TGATTAG | Design primers |
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