Microsatellites /Tandem Repeats database

Genome: Mycobacterium smegmatis str. MC2 155

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
169018CGGGCTCGG-CGGGCTCGG-CGGGCTCGG-CGGGCTCGGDesign primers
954405CCGTTGCCG-CCGTTGCCG-CCGTTGCCGDesign primers
954962GCCGTTGCC-GCCGTTGCC-GCCGTTGCCDesign primers
955647CCGTTGCCG-CCGTTGCCG-CCGTTGCCGDesign primers
1238308GACGTCAAG-GACGTCAAG-GACGTCAAGDesign primers
1326565CTGGATGG-CTGGATGG-CTGGATGG-CTGGATGG-CTGGATGGDesign primers
2103432CGCGACCGA-CGCGACCGA-CGCGACCGADesign primers
2503377GCTGCCCGTACTGGG-GCTGCCCGTACTGGG-GCTGCCCGTACTGGGDesign primers
3005805TGGCTTCG-TGGCTTCG-TGGCTTCGDesign primers
3125663TCGCGGGGCCG-TCGCGGGGCCG-TCGCGGGGCCGDesign primers
4377892CGACGTGTAAGTCGGCTCGCCGACG-CGACGTGTAAGTCGGCTCGCCGACG-CGACGTGTAAGTCGGCTCGCCGACGDesign primers
4379003CTCAGCCGCTACATCCACTTGGCGG-CTCAGCCGCTACATCCACTTGGCGG-CTCAGCCGCTACATCCACTTGGCGG-CTCAGCCGCTACATCCACTTGGCGGDesign primers
4432281GGTGCCTT-GGTGCCTT-GGTGCCTTDesign primers
4432323TGCCTTGG-TGCCTTGG-TGCCTTGGDesign primers
4711670TCGTCGGAG-TCGTCGGAG-TCGTCGGAGDesign primers
4711948CTCGTGGTC-CTCGTGGTC-CTCGTGGTCDesign primers
4714253GGTTCGGCA-GGTTCGGCA-GGTTCGGCADesign primers
4834874CTTGCTTGT-CTTGCTTGT-CTTGCTTGTDesign primers
5209793CGGGCTCGG-CGGGCTCGG-CGGGCTCGGDesign primers
5227320CGCTCGCGGTGCCGGGTG-CGCTCGCGGTGCCGGGTG-CGCTCGCGGTGCCGGGTGDesign primers
5673706TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGC-TCTGGCDesign primers
5853305GTGACGCC-GTGACGCC-GTGACGCCDesign primers
5900032CTGACCCC-CTGACCCC-CTGACCCCDesign primers
6333674ACCACG-ACCACG-ACCACG-ACCACGDesign primers
6480628CCGAAAAGC-CCGAAAAGC-CCGAAAAGC-CCGAAAAGC-CCGAAAAGCDesign primers
6488664CCCGCA-CCCGCA-CCCGCA-CCCGCADesign primers
6555832CCGGTGGTC-CCGGTGGTC-CCGGTGGTCDesign primers

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