Microsatellites /Tandem Repeats database

Genome: Phaeobacter gallaeciensis DSM 17395

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
52314GGCAATGGGTGGGGCAATGGCTGGGGCAACGGTTGGDesign primers
191103GATCGGGATCTGGATCAGGATCGGDesign primers
197646CTGGCG-CTGGTG-CTGGTG-GTGGCGDesign primers
227774CGC-CGC-CAC-CGC-CGC-CGC-CGC-CGCDesign primers
514444CTCGGTCTCAGTCTTGGTCTCGGTDesign primers
635105TTCGCTGCGGGCTTTTTCGCGGCGGGTTTCTTCGCCGCTGTCTTTDesign primers
642324GGCGCTGTCGCTGGGGCTGGCGCTDesign primers
655390TGGTGACCGTGGTGACGGTGATGACCGDesign primers
853895GAGGCGGAGGAGGTGGCGGAGGCADesign primers
910284AGG-ACG-ATG-ACG-ACG-ACG-AGG-ACGDesign primers
964393GTCGG-GCTGG-GCTGG-GCTGG-GCTGG-GCTGGDesign primers
995455CAACAGCCGCCGGTGCAGCAGTCCCCGGTGCAACAGGCGCCGATGDesign primers
996192TTCAACGCCTTGCAGCGCCTGTCACCGCCTDesign primers
1005335CGGCGCAT-CGGCGCAT-CGGCGCCTDesign primers
1159020TTCTTGCAAGCCGGCCTCTGGCAAGTCGGCTTCTGGCAAGTCGACDesign primers
1159348ACCAACGGCTCAGGC-ACAGACTGCTCAGGC-ACAGACTGCTCAGGC-ACAGACTGCTCAGGC-ACAGACTGCTCAGGC-ACAGACTGCTCAGGC-ACAGACTGCTCAGGCDesign primers
1319777CATGGGCGGTATGGGCGGCATGGGTGGDesign primers
1342848GGCGCTGGTGCTGGGGCTGGCGCGDesign primers
1359552GAGGCCGTGGCCGAGGCAGAAGCCDesign primers
1722407GAACTGCAATCCACCAACGAGGAGCTGCAAGCCACCAATGAAGAGCTGGAAACCTCCAACGAGGAACTGCAATCCACCAACGAADesign primers
1795638CGGCGCAGCTGGCATCGGCGCTGCTGGCGTTGGCGCAGCGGACATDesign primers
1796490CTGGGCCTCTGCCTGGGCCTCCGCATGGGCCTCCGCDesign primers
1872028ATCGCACCCGGATCATCACACCCAGATCATCACACCCAGATCDesign primers
1982196CCCGGTCACCTGCTC-GCCGGTCACCTGCTC-GCCGGTCGTCTGCTCDesign primers
2085574TAGTCG-CAGGCG-CAGGCG-CAGGCG-CAGGCG-CAGTCG-CAGTCG-CAGGCG-CAGTCG-CAGTCG-CAGTCG-CAGGCG-CAGTCG-CAGTCG-CAGTCG-CAGTCG-CAGTCG-CAGGCG-CAGGCG-CAGGCG-CAGGCGDesign primers
2085701AGGCGCAGTCGCAGTCGC-AGGCGCAGTCGCAGTCGC-AGTCGCAGTCGCAGTCGC-AGGCGCAGTCGCAGTCGCDesign primers
2085774TTCGCA-GGCGCA-GGCGCA-GTCGCA-GTCGCA-GGCGCA-GTCGCA-GTCGCA-GTCGCADesign primers
2200800GGCAATGGCGATGGCAAGGGCTATDesign primers
2287509GGTATGGGCATGGGGATGGGCATGDesign primers
2332335TTCTGTTTTGTGCTGTTCTGTTCTGDesign primers
2475166GCCACCGCCGCCGCCAGCACCACCGCGACCGCCGCCDesign primers
2483955AGCCCGAAGAGACCGAAGAGACCGAAGDesign primers
2545888CGCAGTT-AGCAGTT-AGCAGTT-AGCAGTTDesign primers
2595819TCATGCCGC-CCATGCCGC-CCATGCCGCDesign primers
2677972CCCCGCTCCGCCGCGACCCGCGCCGDesign primers
2920107CCATCGCCATGGCCACCGGCATCGDesign primers
3129965CGCCGCCGCAGCCGCCGGCGACGCDesign primers
3342860CAACCCACCCCGACCCACCCCAGCCDesign primers
3497276CGCCGTCGCCGGAGCCGTCGCCGTDesign primers

Please help us improve this resource by reporting problems, suggestions etc.