Microsatellites /Tandem Repeats database

Genome: Burkholderia cepacia GG4

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
127906CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGACDesign primers
130622GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCA-GCACCTCADesign primers
130719CACCCCAG-CACCCCAG-CACCCCAG-CACCCCAG-CACCCCAG-CACCCCAG-CACCCCAG-CACCCCAGDesign primers
503012GTTCTC-GTTCTC-GTTCTC-GTTCTC-GTTCTCDesign primers
522394GGGAAGC-GGGAAGC-GGGAAGC-GGGAAGCDesign primers
522423GAAAGCG-GAAAGCG-GAAAGCG-GAAAGCGDesign primers
522453AAGCGGA-AAGCGGA-AAGCGGA-AAGCGGA-AAGCGGA-AAGCGGADesign primers
563983CCAGCAAGGA-CCAGCAAGGA-CCAGCAAGGA-CCAGCAAGGA-CCAGCAAGGA-CCAGCAAGGA-CCAGCAAGGA-CCAGCAAGGADesign primers
801491GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCA-GTGCCADesign primers
826287CGCGTAT-CGCGTAT-CGCGTAT-CGCGTAT-CGCGTAT-CGCGTAT-CGCGTAT-CGCGTATDesign primers
848822CCG-CCG-CCG-CCG-CCG-CCG-CCG-CCG-CCG-CCG-CCG-CCG-CCGDesign primers
964130GCGCGACG-GCGCGACG-GCGCGACGDesign primers
964169GGTGCGAT-GGTGCGAT-GGTGCGATDesign primers
991573CCGCTACCA-CCGCTACCA-CCGCTACCA-CCGCTACCA-CCGCTACCA-CCGCTACCA-CCGCTACCADesign primers
992275CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCA-CCACCGGAAGCACCADesign primers
992498TCGTACCGCCCG-TCGTACCGCCCG-TCGTACCGCCCG-TCGTACCGCCCGDesign primers
1043615GACTTC-GACTTC-GACTTC-GACTTC-GACTTC-GACTTCDesign primers
1125118TGCCATTGCCGT-TGCCATTGCCGT-TGCCATTGCCGTDesign primers
1125155GCCATTGCCGCT-GCCATTGCCGCT-GCCATTGCCGCTDesign primers
1303912GGTGCTGA-GGTGCTGA-GGTGCTGA-GGTGCTGADesign primers
1573593TCAGCGGA-TCAGCGGA-TCAGCGGADesign primers
2285807GCCGAA-GCCGAA-GCCGAA-GCCGAA-GCCGAA-GCCGAA-GCCGAA-GCCGAADesign primers
2397771GCTTCGGCTTCGGTGGCT-GCTTCGGCTTCGGTGGCT-GCTTCGGCTTCGGTGGCTDesign primers
2398303GTCACGG-GTCACGG-GTCACGG-GTCACGG-GTCACGG-GTCACGG-GTCACGG-GTCACGGDesign primers
2527102GGCTCGCCG-GGCTCGCCG-GGCTCGCCGDesign primers
2644958CGCGAAGGC-CGCGAAGGC-CGCGAAGGCDesign primers
2833302CGGCGCAAT-CGGCGCAAT-CGGCGCAATDesign primers
2924915GCGTCG-GCGTCG-GCGTCG-GCGTCGDesign primers
2937471GCCGCTCAG-GCCGCTCAG-GCCGCTCAG-GCCGCTCAG-GCCGCTCAGDesign primers
3055180GTTGG-GTTGG-GTTGG-GTTGG-GTTGGDesign primers
3099379TTGATCTGCTG-TTGATCTGCTG-TTGATCTGCTG-TTGATCTGCTGDesign primers
3099429TGCTGTTGATC-TGCTGTTGATC-TGCTGTTGATCDesign primers
3099463GCCGTTGATCT-GCCGTTGATCT-GCCGTTGATCT-GCCGTTGATCTDesign primers

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