Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes SLCC2372

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
159147AGTACCACCAACACC-AGTACCACCAACACC-AGTACCACCAACACCDesign primers
618117TTTGTA-TTTGTA-TTTGTA-TTTGTA-TTTGTA-TTTGTADesign primers
880281TAAAACCTA-TAAAACCTA-TAAAACCTA-TAAAACCTA-TAAAACCTA-TAAAACCTADesign primers
1148625GTAGATCCG-GTAGATCCG-GTAGATCCGDesign primers
1148661GTAGATCCG-GTAGATCCG-GTAGATCCG-GTAGATCCGDesign primers
1148730CCGGTAGAT-CCGGTAGAT-CCGGTAGATDesign primers
1335585CCAGACCCAACA-CCAGACCCAACA-CCAGACCCAACADesign primers
1890965GCATCA-GCATCA-GCATCA-GCATCADesign primers
1891001GCATCA-GCATCA-GCATCA-GCATCADesign primers
1891055GCATCAGCATCCGCATCAGCATCA-GCATCAGCATCCGCATCAGCATCA-GCATCAGCATCCGCATCAGCATCADesign primers
1891128CATCAG-CATCAG-CATCAG-CATCAG-CATCAG-CATCAG-CATCAG-CATCAG-CATCAGDesign primers
1891199GCATCA-GCATCA-GCATCA-GCATCA-GCATCA-GCATCA-GCATCA-GCATCA-GCATCADesign primers
1891289GCGTCAGCATCA-GCGTCAGCATCA-GCGTCAGCATCADesign primers
1891523GCATCCGCGTCGGCATCA-GCATCCGCGTCGGCATCA-GCATCCGCGTCGGCATCADesign primers

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