Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes SLCC2372

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
159146TAGTACCACCAACAC-CAGTACCACCAACAC-CAGTACCACCAACACDesign primers
618115TGTTTG-TATTTG-TATTTG-TATTTG-TATTTG-TATTTGDesign primers
880279TGTAAAACC-TATAAAACC-TATAAAACC-TATAAAACC-TATAAAACC-TATAAAACCDesign primers
1148621TCCAGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGA-TCCAGTAGA-TCCGGTAGA-TCCGGTAGA-TCCGGTAGADesign primers
1148730CCGGTAGAT-CCGGTAGAT-CCGGTAGATDesign primers
1335584TCCAGACCCAAC-ACCAGACCCAAC-ACCAGACCCAACDesign primers
1890179GCATCAGCGTCAGCATCCGCGTCAGCATCGGCGTCADesign primers
1890788TCAGCATCCGCATCAGCA-TCAGCATCCGCATCAGCA-TCCGCATCCGCATCAGCADesign primers
1890866TCAGCATCCGCGTCGGCATCCGCGTCAGCATCCGCATCAGCATCCGCADesign primers
1890915CCGCATCCGCATCAGCATCAGCATCCGCATCCGCATCCGCATCAGCATCCGCATCAGCATCAGCATCAGCATCAGCATCCGCATCCGCATCAGCATDesign primers
1891040TCAGCA-TCCGCA-TCCGCA-TCAGCA-TCCGCA-TCAGCA-TCAGCA-TCAGCA-TCCGCADesign primers
1891113CCGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCCGCATCAGCATCGGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCAGCATCCGCATCAGCATDesign primers
1891280TCAGCATCCGCGTCAGCATCAGCGTCAGCATCAGCGDesign primers
1891346TCAGCATCCGCGTCGGCATCCGCGTCAGCATCGGCGTCAGCATCCGCADesign primers
1891499GCATCCGCATCCGCGTCG-GCATCCGCATCCGCGTCG-GCATCAGCATCCGCGTCG-GCATCAGCATCCGCGTCGDesign primers
1891580TCGGCATCCGCGTCGGCATCAGCGTCGGCATCCGCADesign primers
1891617CCGCGTCAGCAT-CCGCGTCAGCAT-CAGCGTCAGCAT-CCGCGTCAGCATDesign primers
1891691GCATCCGCGTCGGCATCAGCGTCGGCATCCGCGTCAGCATCCGCATCGDesign primers
2396750TTTTTCTGATTCTTTTTCTGGTTCTTTTTCTGGTTCDesign primers

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