Microsatellites /Tandem Repeats database

Genome: Vibrio parahaemolyticus BB22OP

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
82321ATCAGTGACCA-TTCAGTGACCA-TTCAGTGACCADesign primers
443784TTGTGT-CTGTGT-CTGTGT-CTGTGT-CTGTGT-CTGTGT-CTGTGT-CTGTGTDesign primers
448337GTTGATGTCCTTCGGGAGACTGACGTTGAGGTCCTTCGGGAAACTGACGTTGACGTCCTTCGGGAGACTGACDesign primers
465644TGATGGT-TGATGGT-TGATGGT-TGATGGT-TGATGGTDesign primers
616213TAGCCCAAG-TAGCCCAAG-TAGCCCAAG-TAGCCCAAG-TAGCCCAAGDesign primers
1462455ATTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTC-GCTTCTCDesign primers
2276733GAGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTC-TGGCTCDesign primers
2634582AGGTTCT-AGGTTCT-AGGTTCT-AGGTTCT-AGGTTCTDesign primers
3076663CAATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAG-AGATAGDesign primers
3143356TCT-TCT-GCT-TCT-GCT-TCT-GCT-TCT-GCT-TCT-GCT-TCT-GCT-TCT-GCT-TCT-GCT-TCT-GCT-TCTDesign primers
3199076ATCTCA-AACTCA-AACTCA-AACTCA-AACTCA-AACTCADesign primers

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