This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 13500 | AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA-AGCA | Design primers |
| 85307 | AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC-AC | Design primers |
| 85414 | CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC-CAAC | Design primers |
| 215241 | GTAGTAGTAA-GTAGTAGTAA-GTAGTAGTAA | Design primers |
| 215272 | TAGTAGTTGG-TAGTAGTTGG-TAGTAGTTGG-TAGTAGTTGG | Design primers |
| 648126 | TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC-TGGAGC | Design primers |
| 963162 | GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT | Design primers |
| 1102679 | GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG-GCTGTCG | Design primers |
| 1254718 | TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC-TTGC | Design primers |
| 1359038 | GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT-GCTGT | Design primers |
| 1421802 | CCAGTTTCG-CCAGTTTCG-CCAGTTTCG-CCAGTTTCG-CCAGTTTCG-CCAGTTTCG-CCAGTTTCG-CCAGTTTCG | Design primers |
| 1473932 | ATTTTCCCT-ATTTTCCCT-ATTTTCCCT | Design primers |
| 1476354 | ATTGTCCTAT-ATTGTCCTAT-ATTGTCCTAT | Design primers |
| 1568793 | ACCACCTGCAGAGACAAAA-ACCACCTGCAGAGACAAAA-ACCACCTGCAGAGACAAAA-ACCACCTGCAGAGACAAAA | Design primers |
| 2032114 | ATAGTGA-ATAGTGA-ATAGTGA-ATAGTGA-ATAGTGA-ATAGTGA-ATAGTGA | Design primers |
| 2106938 | TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT-TGCT | Design primers |
| 2382575 | TTTTTATCCTCTTCAGTT-TTTTTATCCTCTTCAGTT-TTTTTATCCTCTTCAGTT-TTTTTATCCTCTTCAGTT-TTTTTATCCTCTTCAGTT | Design primers |
| 2447413 | TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA-TTGA | Design primers |
| 2542029 | TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA-TGGTTGGAA | Design primers |
| 2577741 | ACAAAAAACA-ACAAAAAACA-ACAAAAAACA | Design primers |
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