This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 13499 | GAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC-AAGC | Design primers |
| 85306 | AA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA-CA | Design primers |
| 85412 | AACA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA-ACCA | Design primers |
| 200918 | CCGGTATTAACC-TCGGTATTAACC-TCGGTATTAACC | Design primers |
| 215236 | AGTTGGTAGTAGTAAGTAGTAGTAAGTAGTAGTAAGTAGTAGTTGGTAGTAGTTGGTAGT | Design primers |
| 648124 | TGTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA-GCTGGA | Design primers |
| 782556 | CCTGAGGAGCATTTTGTG-CCTGAGGAGCATTTTGTG-CCTGAGGGGCATTTTGTG | Design primers |
| 937387 | ATGCAGCAGCAA-ACGCAGCAGCAA-ACGCAGCAGCAA-ATGCAGCAGCAA | Design primers |
| 963160 | ACGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT | Design primers |
| 1102676 | TGAGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG | Design primers |
| 1254716 | CTTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT-GCTT | Design primers |
| 1359036 | AGGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT | Design primers |
| 1421801 | ACCAGTTTC-GCCAGTTTC-GCCAGTTTC-GCCAGTTTC-GCCAGTTTC-GCCAGTTTC-GCCAGTTTC-GCCAGTTTC | Design primers |
| 1451011 | ACAATAACCGACAATAACAGATAATAACCG | Design primers |
| 1473932 | ATTTTCCCT-ATTTTCCCT-ATTTTCCCT | Design primers |
| 1476353 | AATTGTCCTA-TATTGTCCTA-TATTGTCCTA | Design primers |
| 1568791 | ACACCACCTGCAGAGACAA-AAACCACCTGCAGAGACAA-AAACCACCTGCAGAGACAA-AAACCACCTGCAGAGACAA | Design primers |
| 2032111 | TGTATAG-TGAATAG-TGAATAG-TGAATAG-TGAATAG-TGAATAG | Design primers |
| 2106936 | AATG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG-CTTG | Design primers |
| 2382574 | CTTTTTATCCTCTTCAGT-TTTTTTATCCTCTTCAGT-TTTTTTATCCTCTTCAGT-TTTTTTATCCTCTTCAGT-TTTTTTATCCTCTTCAGT | Design primers |
| 2447405 | TTGGTTGGTTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGA | Design primers |
| 2542026 | GACTGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG-GAATGGTTG | Design primers |
| 2577739 | CTACAAAAAACAACAAAAAACAACAAAAAA | Design primers |
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