Microsatellites /Tandem Repeats database

Genome: Chlamydia trachomatis E SotonE8 high quality draft genome

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
57167TGGTGTAGGATCTGGGGTAGGAGCTTGTGTAGGAGCDesign primers
214264AAATAAAAAAAGAAAAAATTAAAADesign primers
521189CAAATCAAAGCAAACAAAATAAAATDesign primers
657638AAACAAGGGATTAAACAAGGGATCAAACAAGCCATTDesign primers
866036AA-GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NNDesign primers
888087AA-GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NNDesign primers
924652TT-TT-TN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NDesign primers
975262GC-GT-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NDesign primers
1012861CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NDesign primers

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