Microsatellites /Tandem Repeats database

Genome: Mycoplasma putrefaciens Mput9231

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
12348AAATAATCTTAAATAAAATTAAAAAATATTDesign primers
85111TT-AT-TT-TT-TT-AC-TT-TT-TT-CT-TT-TTDesign primers
150413TTAATTTTATTTAGTTTATTTTTATDesign primers
172011ACTTTCACATGATTTTTCACTACCACATGATTTTGCGCTTTCACATGATTTTTCDesign primers
182969AATGATTAATAATTATTGATTAATTATTDesign primers
224916AAATTAATTTAAATAATATTTAATTAAATADesign primers
236038TAAATTTACATTTAAATTTAAATTDesign primers
243573ATCATTTGCTATTATTTACTATCATTTTGTDesign primers
267398TATATAGATGTATAGATGTATAGADesign primers
325609TATTTTTAATTTTATTTGTATTTCDesign primers
341555ATAACTTATATATCTTATATATCTTATDesign primers
352089TTTTATCTTTATTTTTCTTTTTAGDesign primers
362694TTTAATTCTTTAA-TTTAATTCTTTAA-TTATATTCTTTAADesign primers
408173AATAATAATAGCGCTAATAATAATACTAATAGTGGTGCTAATAATAATAATAATAATGGAACTAATAACAATDesign primers
429908AAAATGATAGTAAATAATAGCAAATGATTGDesign primers
479358TATTT-TATTT-CATTT-TTTTT-TTTTTDesign primers
520140GTTGTTGGTTTGGATCTTGGTTTGGATCTTGGTTTGDesign primers
557978TAGTTTTTTTATTTTTTTTAATTTTTTDesign primers
589196TTTTTTTTCTTTTTCTTGTTGTTTTTGTTTTTTTCDesign primers
603397TTA-TTA-TTA-GTA-TTA-TTA-TTA-ATADesign primers
611097TTGATTTTGAGTCTGATTTTGACTDesign primers
613724AGATAGTTTAAAAGAGTTTAAGACAGTTTTDesign primers
619978CTGGCTCTGGATCTGGTTCTGGTTDesign primers
624155TGGTGATGGATTTGGTTCTGGATTTGGAGATGGAGTDesign primers
637510TTATTATTTTTATTACTATTATTCDesign primers
639895TTTGAT-TTTGAT-TTTCAT-TTTTATDesign primers
722389TTAAAAAAATAAAAAATCAAAAAADesign primers
726384AGTTTGAATTTGAGTTTGAGTTTTDesign primers
754716TTTTCATATTCATTTACATTTTCADesign primers
780669ATTTTTATTATTATTATTATTTTGDesign primers
818844TTTATTCTAATTTTACTCTTATATTACTCTAATDesign primers
828807AAAACTCCAGCAAAAAAAGCTCCAGTTAAAAAGACTCAATCAAAADesign primers
828853AAAATAAACCAATGGAAGTTAAGCCAATGGAAGTTAAGCCAATGGDesign primers
839359AAATAAAAACAAAACTAAAAATGADesign primers
846796TTTTCTAATATTTCCTATTATTTTATAAAADesign primers

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