Microsatellites /Tandem Repeats database

Genome: Salmonella enterica subsp. enterica serovar Typhimurium str. U288

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
1173034AAATTTCGG-AAATTTCGG-AAATTTCGGDesign primers
1267951CGGCAGCGGCGT-CGGCAGCGGCGT-CGGCAGCGGCGTDesign primers
1943597GCAAGG-GCAAGG-GCAAGG-GCAAGG-GCAAGG-GCAAGG-GCAAGG-GCAAGG-GCAAGGDesign primers
1971817TGGTTG-TGGTTG-TGGTTG-TGGTTGDesign primers
3075370TCTCGG-TCTCGG-TCTCGG-TCTCGGDesign primers
3182131CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGACDesign primers
3244293TGCGATGTC-TGCGATGTC-TGCGATGTC-TGCGATGTC-TGCGATGTCDesign primers

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