This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 194714 | TGAGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG-TCGGCTG | Design primers |
| 456201 | AGGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT-GTGCT | Design primers |
| 553421 | CTGCTGCATTTG-CTGCTGCATTTG-CTGCTGCGTTTG | Design primers |
| 608481 | TGAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT-CAAAT | Design primers |
| 694087 | CTCCTCAGGTACAAAATG-CTCCTCAGGTACAAAATG-TTCCTCAGGTACAAAATG | Design primers |
| 826825 | TGATCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC-AGCTCC | Design primers |
| 1216751 | TTTTTCTCAGCCCAATTTTTCTCAGCCCAGTTTTTATCAGCCCAA | Design primers |
| 1283979 | TCCTACCAAC-TACTACCAAC-TACTACCAAC-TACTACCAAC | Design primers |
| 1294520 | GTTATAAG-GTTATAAG-GTTATAAG | Design primers |
| 1446109 | CAGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT-TGGT | Design primers |
| 2082932 | TTTCACT-ATTCACT-ATTCACT-ATTCACT-ATTCACT-ATTCACT | Design primers |
| 2452123 | TTTACCCACTGCTTACCCACTGTTTACCCACTG | Design primers |
| 2453942 | TTCAACTTGGCTTAAGTCTTCAAATTGGCTTAAGTCTTCAAATTGGCTTAAGTC | Design primers |
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