Microsatellites /Tandem Repeats database

Genome: Salmonella enterica subsp. enterica serovar Bovismorbificans str. 3114

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
203CACCACCACCATTACCACCATCACDesign primers
66805TTT-TAA-TTA-ATT-TAA-TTA-TTT-TTA-TTADesign primers
198214GGCGAGATGGATCATGGCAACATGGATCACAGCGGGATGAATCATDesign primers
245278CGGCGGTAACGGCGGCAACGGCGGTCADesign primers
346427TGCTATCGCTATTACTATTGCGATDesign primers
469777GCGAAAGAGAAAGCGGAAGCGGAADesign primers
619139TGGTGGTGGTCGTGGTGCTGGCGGDesign primers
1039851GCGGCAGCCGCATCGGCAGCCGCADesign primers
1040082GCGGCAGCCGCATCGGCAGCCGCADesign primers
1063213CCGGAG-CCGGAG-CCGGTG-CCGGAGDesign primers
1137398ACGAAAAATAACCAGAAATAACAAAAAATADesign primers
1219970GGTGTCACGACGAGTCACGACATGTCACGADesign primers
1276849TTTCTCTCTTCGTCATACTCTCTTCGTCATACTCTCTTCGTCDesign primers
2295090GCAGCGCCA-GCAGCGCCA-GCGGCGCCADesign primers
2515179ACGCCGTCGCACGCCGCCTCACGCAGTTGCDesign primers
2930626TATGGGTTTATGTGAGTTTATAAGGGTTTTDesign primers
3021425GTTGTGATGTTGTGTTGTTGTGTTDesign primers
3070589CACAAC-CACAAC-CACGAC-CACGAC-CACGAC-CACGAC-CACGACDesign primers
3110064CCGGCGCTGGCGCCGGTGCTGGCGDesign primers
3130824GTTTGCGATGTCTGCGATGTCTGCGATDesign primers
3352925TCGCTT-TCGCTT-TCTCTT-CCGCTTDesign primers
3353692TCGCCGCCGTCGCCGCCATCACCGCCGDesign primers
3591576ATGCAGACGCAGATGCAAACGCAGDesign primers
3682119CACCAG-CACCAG-CGCCAG-CAGCAGDesign primers
3989212CTGGCGCTGGTGCCGGCGCTGGTGDesign primers
4097332TCATTATAATTAACATTATCAATADesign primers
4186778CGCGGTAAATCTCGATAAATGGCGGTAAAADesign primers

Please help us improve this resource by reporting problems, suggestions etc.