Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Pseudomonas aeruginosa c7447m genome

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
53821	GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
78691	GCCGAAGCCGTAGCCGACGCCGAT	Design primers
90373	CNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
97291	GCAGGTGCAGGCGCTGGTGCGGGT	Design primers
100388	TG	Design primers
	GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCTGTG-GCT	Design primers
167482	TGG	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
181138	GCCGCCGCCGGCACCGCCGCGGCC	Design primers
195778	CC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
202711	GGCCTCGGCCGCGGCCGCGGCTTC	Design primers
235188	GT-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-N	Design primers
237080	TG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
239856	CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
240411	CG-GC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
348053	ATCCTGATCATCCCGATCATCCTGTTC	Design primers
423876	GCTGCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC-GAGCCC	Design primers
458736	TGACCGTGGCCGCGACCGTGACCG	Design primers
490767	CGGCGGCGGCGATGGCGGCGGCGG	Design primers
507833	CA-AG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
540033	GGCGAGGGCGATGGCTAGGGCGAG	Design primers
644705	CGCCGTCGCCTTCGTCGTCGCTGT	Design primers
661586	GCCCGGGCCGGACCGGGGCGGCCAGGGGCG	Design primers
690378	CC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
702694	GC-GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
706588		Design primers
	GT-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
706649	NN-NN-NN-NN-NN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA	Design primers
710040	AA-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-N	Design primers
796858	CC-CC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
800409	TG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
800709	AG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
801749	TG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
803501	GG	Design primers
	CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
803562	NN-NN-NN-NN-NN-NN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG	Design primers
805725	GC-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
877707	CTG-GTG-ATG-GTG-GTG-GTG-CTG-ATG	Design primers
982044	TCCTGTTCCTGCTGCTGTTCCTGT	Design primers
1070344	AGAAGCTCGAGCAGCAGAAACTCGAGCAACAAAAGCTGGAACAGC	Design primers
1070707	GGC-CGC-CGC-CGC-TGC-CGC-GGC-AGC	Design primers
1072534	CTGGCTCTGGCCATGGCTGTGGCT	Design primers
1075896	TG-GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
1090025	AGAAGAGCAGAGYAGAGCAGAGYAG	Design primers
1260409	GA-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
1299158	GACCTGGAACTGGACCTCGACCTG	Design primers
1389990	CCGCGCCGAGCAGCGCCGAGCCGAG	Design primers
1428514	GG	Design primers
	TCG-TGG-TGG-TGG-TGG-TGG-TGG-TGG-TGG-TGG-TGG-TGG-TGG-TGG	Design primers
1472201	CGGCGCTGGCGCCGGCGCCGGCGA	Design primers
1486594		Design primers
	AT-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
1516851	GG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
1517648	CT-GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
1518505	AT-TT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
1518793	AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
1552112	CGCGGGCGCAGGCGC	Design primers
	GGCGCTGG	Design primers
1694869	GCCGAG-CCCGAG-CCCGAG-CCCGAG-CCCGAG	Design primers
1734537	GCTGCCGCCGTTGCCGCCGTTGCCGCC	Design primers
1870888	TGTTGG-CGTTGG-CGTTGG-CGTTGG	Design primers
1870915	TG	Design primers
	GCGTTG-GCGTTG-GCGTTG-GCGTTG-GCGTTG-GCG	Design primers
1891649		Design primers
	CGCCTG-CGCCTG-CGCCTG-CGCCT	Design primers
2142632	AA	Design primers
	CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2142693	NN-NN-NN-NN-NN-NN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC	Design primers
2143392	CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NNNNNNNNN	Design primers
2143645	CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2144045	CCNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2144144	CC-GG-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2151359	NNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2290516	CAGCGCCAGCG	Design primers
	CATCGCCATCGCCCGCGC	Design primers
2310749	AA-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2311111	GNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2311474	GA-TC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2311535	NNNNNNNN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA	Design primers
2334363	CCTCGGACTCGGCTTCGGCGTCGG	Design primers
2339949	GGCCGAGGCCGCGGTCGATGCCGA	Design primers
2475049	GNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2477733	CA-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NNNNNNNN	Design primers
2478101	CGNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2588843	TC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN	Design primers
2611485	CGTCGGCGCCGGCGGCGGCGTTGG	Design primers
2685247	AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2686008	CC-TN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2686588	TC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2689247	TG-CN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2690249	GAAGNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2695763	AG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2696451	AT-AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2697315	TG-GG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2697577	TC-CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2697638	NNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2698052	CN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN	Design primers
2698785	GC-AT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2699597	GG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN	Design primers
2700541	GCANNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2702887	NNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2703281	GT-CT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2703868	GC-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NNNNNNNN	Design primers
2707811	AG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2709386	CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2709491	CNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2709723	AG-CC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2711336	CAGGNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2711412	NNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2711904	CGCANNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2712865	CT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NNNNNNNN	Design primers
2714294	TC-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2714584	CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN	Design primers
2715379	CGCANNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2715455	NNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2715973	CC-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2716885	AC-GT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2716946	NNNNNNN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG	Design primers
2717367	GG-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2717841	TG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2717926	AG-CG-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2718007	NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-N	Design primers
2718227	GCGN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2720037	AC-AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2721684	CC-GA-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2722024	CT-TC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2722919	GC-CC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2722980	NNNNNNNN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT	Design primers
2723175	CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN	Design primers
2724126	TC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2725265	GG-TC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2725326	NNNNN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT	Design primers
2726994	CCGCCGCGGCCGCTGCCGGCGCCG	Design primers
2744852	CNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2772734	CCGTGA-TCGTGA-TCGTGA-TCGTGA	Design primers
2802234	TC-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2802361	TCGTN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2802684	TG-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2803181	CC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2804001	TG-CA-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2804062	NNNNNNNN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC	Design primers
2810731	GCTGNNNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2811471	CC-GT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2812378	GC-AG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
2815501		Design primers
	AC-TN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
2815562	NN-NN-NN-NN-NN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC	Design primers
2836904	TGAGCCTGCGCCTGCGCCTGACCCTGATCC	Design primers
2846318	CGGCCAGC-CGGCCAGC-CGGCCATC	Design primers
2892253	CCAGCGCCACCGCCAGCGCCAGCT	Design primers
2976884		Design primers
	AN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3066455	AACCCGACGAAACCAGAGGAAGCCCGATGA	Design primers
3137265	ANNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-N	Design primers
3215779	TC-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NNNNNNNNN	Design primers
3216110	CA-AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3217148		Design primers
	GA-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3217209	NN-NN-NN-NN-NN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG	Design primers
3248266	CACCGCAACCGCAACCGCCACCGG	Design primers
3264511	GTGCTG-GTGCTG-ATGCTG-GCGCTG	Design primers
3340439	CGCCGCGGCCGCCGGCGCCGCCGG	Design primers
3379773	TCCAGATCGAGAGCCAGATCGAGA	Design primers
3413482	AGAGAAA-GGAGAAA-GGAGAAA-GGAGAAA	Design primers
3526735	CACCACCGCCACCACCAGCAGCAC	Design primers
3576956	CG-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NNNNNNNNN	Design primers
3739647	GG-TG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3802090	GTCGAGATCGAGATCGAGGTTGAG	Design primers
3864955	CGGCGCCGGGGCCGGCGCCGGGGC	Design primers
3928058	GACTNNNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3928134	NNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3958057	TC-TG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3959426	AG-CG-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3971675	GA-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3972173	GC-TT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3973450	TC-CT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3973953	GC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3974918	CTTGNNNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3974994	NNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3975378	GG-CG-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3977351	CC-AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3977412	NNNN	Design primers
	NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNC	Design primers
3980147	CC-CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3980882	GAACNNNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3980958	NNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
3981119	GC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3981633	CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3983410	TA-AC-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
3983737	CG-GA-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
4231067	GGCGCGGCTGCGCGGCGGCGCCGC	Design primers
4380524	GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
4391663	AT-GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-N	Design primers
4421704	CGGCGCCGGCCCCGACGCCGCCGC	Design primers
4491884	GGTTTCTTCGGCTTCTTCGGTTTCTTC	Design primers
4571484	CCAGGAGCAGGACCAGGGCCAGCA	Design primers
4598811	TCGCCGACGCCGTCGACGTGGCCG	Design primers
4604359	GGCCAC-GAACAC-GAACAC-GAACAC-GAACAC-GAACAC	Design primers
4756074	GGCAGCGCCAGCAGCAGCGCCAGC	Design primers
4756100	GGCCAGGACCAGGGTCAGGGCCAG	Design primers
4780838	AA-AA-AA-AG-AA-AA-AA	Design primers
	AA-AA-AA-AA-AA-AA-AA-A	Design primers
4855303	AA-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
5029245	ACCCTGGCCCTGAGCCTGGCCCTG	Design primers
5108816	CC-CN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
5140256	CT-TT-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
5172718	TG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
5420943	GCGCCGCGCTGCGCGCCGCCGCGCG	Design primers
5434773	CGCGCTGCGCGCTTCGCCCTGCTCGCTG	Design primers
5483976	GGCCAGGACCAGCGCCAGGGCCAGGGCCAT	Design primers
5503100	TCAGGGTCAGGCTCATGGTCAGGT	Design primers
5522012	CNNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
5837008	CAACGGCAACGCCAGCGGCAACTG	Design primers
5867175	CAGGATCAGGGTCTGGATCAGGAC	Design primers
5967576	CCGGCATCGCCGGTATCGCCCGCATCG	Design primers
5997942	TTCGCAGCAGGCTTCGCAGCCGGCTTGGCCGCAGGC	Design primers
6006702	CCAGCA-CCAGCA-CGAGCA-CCAGCA	Design primers
6012726	ACCAGCACCGGCACCAGGATCAGC	Design primers
6078178	CGCCACGGCGCGCTCCGGCGCGCCATGGCG	Design primers
6110496	GCCAGCGCCAGACCCAGCGCCAGG	Design primers
6203592	GCGATGGCGGTGGCGATGGCGATG	Design primers
6231684	GAGCCAGAACCAGAGCCAGAGCCG	Design primers
6312154	GGTTTGGGCTTGGGTTTCGGCTTG	Design primers
6351729	CC-CG-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN	Design primers
6351790	NNNNNNNN	Design primers
	NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

53821

GN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-NN-N