This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 244122 | GTTGTG-GTTGTG-GTTGTG-GTTGTG-GTTGTG-GTTGTG | Design primers |
| 349139 | ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA-ACTGCCTCA | Design primers |
| 518427 | CTTGCTG-CTTGCTG-CTTGCTG-CTTGCTG-CTTGCTG-CTTGCTG-CTTGCTG-CTTGCTG | Design primers |
| 551969 | TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC-TGATTACC | Design primers |
| 1033055 | CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG-CACCATCGG | Design primers |
| 1584443 | CCTGTGTTG-CCTGTGTTG-CCTGTGTTG-CCTGTGTTG-CCTGTGTTG-CCTGTGTTG-CCTGTGTTG-CCTGTGTTG-CCTGTGTTG | Design primers |
| 1989880 | TGTCGA-TGTCGA-TGTCGA-TGTCGA-TGTCGA | Design primers |
| 2241303 | ATCATT-ATCATT-ATCATT-ATCATT | Design primers |
| 2258716 | AACCTAAAAGGACTT-AACCTAAAAGGACTT-AACCTAAAAGGACTT | Design primers |
| 2662715 | GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT-GCAAGGCT | Design primers |
| 2681542 | CAGTTGG-CAGTTGG-CAGTTGG-CAGTTGG-CAGTTGG-CAGTTGG-CAGTTGG | Design primers |
| 2800784 | CCATGA-CCATGA-CCATGA-CCATGA-CCATGA | Design primers |
| 2916636 | GCCAAGGTTGAA-GCCAAGGTTGAA-GCCAAGGTTGAA | Design primers |
| 3238548 | TGAAAAAA-TGAAAAAA-TGAAAAAA | Design primers |
| 4579689 | AGACAGAG-AGACAGAG-AGACAGAG-AGACAGAG-AGACAGAG-AGACAGAG-AGACAGAG-AGACAGAG | Design primers |
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