Microsatellites /Tandem Repeats database

Genome: Streptococcus uberis 0140J

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
17795AA-AA-AA-GA-AA-TA-AA-AA-AA-GA-AA-AA-ADesign primers
87928CATAAAAAAATTTAAAAAAATGTAAAAAAADesign primers
88033AAAAAAGAAATAAAAAAGAAAAAAADesign primers
118438GATGAAGATGACAATGAAGTTGAADesign primers
308897AA-AA-AA-GA-AA-TA-AA-AA-AA-GA-AA-AA-ADesign primers
349478AAAAAAGAAATAAAAAAGAAAAAATDesign primers
760758TTTGAATTTGACTATGAATTTGATDesign primers
810228GGCGTTATTGTTGGCATTATTGCTGGTGTTATAGTTDesign primers
838264GAAATGAAAAGAAATGCGAAGAGTTGAAAADesign primers
1066924TCCGTCAAGTCCGTCACGTCCGTCACGDesign primers
1066952CCATCACGT-CCATCACGT-CCATCACGTDesign primers
1185020ATTTTTAATTTTCTTTTTACTTTTDesign primers
1195693TTTTATTTCATTTTAGTTTAATTTADesign primers
1196778AATCAACAAAAATCCCCAAAAACCAGCAAADesign primers
1437835TTTTCAAATTTTTCAAAGTTTTCAAGTDesign primers
1456737TT-TT-AT-TG-TT-AT-TT-TT-TG-TT-TG-TT-TT-TG-TTDesign primers
1813846TTATCTTTTCTTGACTTTCATTTTCTTGACTTATATTATCTTGACTTATATTATCTTGACDesign primers

Please help us improve this resource by reporting problems, suggestions etc.