Microsatellites /Tandem Repeats database

Genome: Azospirillum lipoferum 4B

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
23778GTTCCCGCCGTCCCCCGTTCCCGCCGCCCCCCGTTCCCGCCGTCCCCTDesign primers
410280TGCCGG-AGCCGG-AGCCGG-AGCCGG-AGCCGG-AGCCGGDesign primers
643873CCCGAGATCCGATCCGCCGAGATCCGATCCCCCGAGATTCGATCCDesign primers
702684GCACCCATCCCGGCGCCCATCCCGGCGCCCATCCCGDesign primers
764237GGCAGGTTGG-GGCAGGTTGG-GGCAGGTCGGDesign primers
866695TCAGCGGGGAGG-GCAGCGGGGAGG-GCAGCGGGGAGGDesign primers
882683GTCCGGTCTGCGGCGGTCCAGTCTGCGGCGGTCCGATCTGCGGCGDesign primers
916092GCAAGTCCGTTGGCGCAAGCCCGTTGGCGCAAGTCCGTTGGCGCAAGTCCGTTTGCDesign primers
1088563GCTCGCGGTTCTGGCGCTTGCGGTTCTGGCGCTCGCGGTTCCGGCDesign primers
1093965CCGGTT-CCGGTT-CCGGTT-CCGGTTDesign primers
1113020CGCCGAG-CGCCGAG-CGCCGAG-CGCCGAG-CGCCGAGDesign primers
1287823GCCGGTTCGGGTGTCGGTTCGGGTGCCGGCTCGGGTDesign primers
1288039TCGGAAGCCGGTTCGGAAGCGGGTTCGGAAGCCGGTDesign primers
1330187GGCCCAAAACCTG-CGCCCAAAACCTG-CGCCCAAAACCTG-CGCCCAAAACCTGDesign primers
1349157CCCGGCCAT-CCCGGCCAT-CCCGGCCAT-CCCGGCCATDesign primers
1546228CGGTCA-CGGTCA-CGGTCA-CGGTCADesign primers
1699023TGCCGATCCCCT-GGCCGATCCCCT-GGCCGATCCCCTDesign primers
1832450GCCTCGGTCTTGGTGGCTTCGGTCTTGGTGGCCTCGCTCTTGGTGDesign primers
1891519CAGGCGGTG-CAGGCGGTG-CAGGCGGTGDesign primers
2312987TTGGTGTTGGCCCTG-TTGGTGTTGGCCCTG-TTGGTGTTGGCCCAGDesign primers
2431470ATCCATC-ATCCATC-ATCCATC-ATCCATCDesign primers
2442415GCGGACGGGGTGGCGGAGGACGGGGTGGCGGAGGACGGGGTGGCGDesign primers
2477801TCCCGATTTCCG-GCCCGATTTCCG-GCCCGATTTCCG-GCCCGATTTCCGDesign primers
2943101CCATCGCCGGCGGCCCCATCACCGGCGGCCCCATCACCGGCGGCCDesign primers

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