Microsatellites /Tandem Repeats database

Genome: Nitrobacter hamburgensis X14

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
104954CGGACG-CGGACA-CGGACA-CGGACA-CGGACA-CGGACADesign primers
584039TAGCGAA-TAGCGAA-TAGCGAA-TAGCGAADesign primers
1042910GCCGAGGGTGCAACG-GCCGAGGGTGCAACG-GCCGGGGGTGCAACGDesign primers
1249218TCCCCAAGGCACTCCACAAGGCACTCCACAAGGCACDesign primers
1591084CCCAAGACGCAACCCAAGACGCACCCCATGACGCAADesign primers
1803039ACA-CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCA-CCADesign primers
1832921CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CTDesign primers
2834837CCGTAATAA-CCGTAATAA-CCGTAATAADesign primers
3529855GAGCCGAGCCTT-GAGCCAAGCCTT-GAGCCAAGCCTT-GAGCCAAGCCTTDesign primers
3735288CCACTTCGG-CCACTTCGG-CCACTTCGGDesign primers
3822870TTCGCG-TCCGCG-TCCGCG-TCCGCG-TCCGCG-TCCGCGDesign primers
3847657GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGT-GGTDesign primers
3861316GCTGCAACT-GCTGCAACT-GCTGCAACTDesign primers
4025732TTTTCTGTGCTTCTTCTGTGCTTCTTCTGTGCTDesign primers
4057668CACTGCCG-CACTGCCG-CACTGCCGDesign primers
4358484TATATTGGT-TATATTGGT-TATATTGGTDesign primers

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