Microsatellites /Tandem Repeats database

Genome: Paenibacillus polymyxa E681

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
430686GAACCAGGT-GAACCAGGT-GAACCAGGTDesign primers
1350638CATCATCGC-CATCATCGC-CATCATCGCDesign primers
2079734ACAACACCAAGC-ACAACACCAAGC-ACAACACCAAGC-ACAACACCAAGCDesign primers
2659299TTCTCAGAACTATA-TTCTCAGAACTATA-TTCTCAGAACTATADesign primers
2797448GTGCTGTA-GTGCTGTA-GTGCTGTADesign primers
2833434GATGTA-GATGTA-GATGTA-GATGTADesign primers
3725556TATTTTTA-TATTTTTA-TATTTTTADesign primers
4683212CTTATT-CTTATT-CTTATT-CTTATTDesign primers

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