Microsatellites /Tandem Repeats database

Genome: Desulfosporosinus orientis DSM 765

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
318000ACGGGAGCAACAGGAGCCACAGGAGCAACAGGAGCCACAGGAGCAACAGGAGCCDesign primers
351594AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers
1559152ACAGGAGCA-ACAGGAGCA-ACAGGAGCA-ACAGGAGCADesign primers
1559206ACAGGAGCGACAGGAGCAACAGGAGCCACAGGAGCAACAGGAGCCACAGGAGCADesign primers
1559284GCAACAGGA-GCAACAGGA-GCAACAGGA-GCAACAGGA-GCAACAGGADesign primers
1559652GCCACAGGA-GCCACAGGA-GCCACAGGADesign primers
1811032TGGGACAGAAGTTA-AGGGACAGAAGTTA-AGGGACAGAAGTTADesign primers
1971044TTAGATTTC-TTAGATTTC-TTAGATTTC-TTAGATTTCDesign primers
1976137ATGATGACGACGATGACGACGACGATGACGACGACGDesign primers
1976177AGACGA-TGACGA-TGACGA-TGACGA-TGACGA-TGACGA-TGACGA-TGACGADesign primers
1976307GAC-GAT-GAC-GAC-GAC-GAT-GAT-GAC-GAC-GAT-GAC-GACDesign primers
2356662AAGAATAGTG-AAGAGTAGTG-AAGAGTAGTG-AAGAGTAGTGDesign primers
3215188GATATACC-GATATACC-GATATACCDesign primers
3720740TTAAAATC-TTAAAATC-TTAAAATCDesign primers
4830086AAAATCA-ATAATCA-ATAATCA-ATAATCA-ATAATCA-ATAATCA-ATAATCA-ATAATCADesign primers
5027876CCTTGCATT-CCTTGCATC-CCTTGCATC-CCTTGCATC-CCTTGCATC-CCTTGCATC-CCTTGCATC-CCTTGCATCDesign primers
5027960GGCATACTT-GGCATACTT-GGCATACTT-GGCATACTT-GGCATACTTDesign primers
5063932CGTACTATC-CGTACTATC-CGTACTATCDesign primers
5300115ACTTGGGTA-ACTTGGGTA-ACTTGGGTADesign primers
5417137ATTAATAACACCTTTGT-CTTAATAACACCTTTGT-CTTAATAACACCTTTGTDesign primers

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