This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 22995 | TAAAAGTTGGAAGCG-TAAAAGTTGGAAGCG-TAAAAGTTGGAAGCG | Design primers |
| 95118 | ATGGGAGAT-ATGGGAGAT-ATGGGAGAT | Design primers |
| 367653 | GATGGAGGC-GATGGAGGC-GATGGAGGC | Design primers |
| 383038 | TTTCTTTTTCTTGTGGGA-TTTCTTTTTCTTGTGGGA-TTTCTTTTTCTTGTGGGA-TTTCTTTTTCTTGTGGGA | Design primers |
| 483827 | TTTTATCACA-TTTTATCACA-TTTTATCACA | Design primers |
| 676456 | AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG-AAAATACGATGAACTCACAGG | Design primers |
| 707980 | CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC-CTCAAATCATCATAATTAACC | Design primers |
| 855134 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 910244 | TTTAATTCTGTG-TTTAATTCTGTG-TTTAATTCTGTG | Design primers |
| 954810 | AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA-AAAAAAAAGAGGGTTTA | Design primers |
| 954961 | AAAAAGAAAGAGTTCA-AAAAAGAAAGAGTTCA-AAAAAGAAAGAGTTCA-AAAAAGAAAGAGTTCA | Design primers |
| 955152 | AAAAAAAAGAGAGTTT-AAAAAAAAGAGAGTTT-AAAAAAAAGAGAGTTT-AAAAAAAAGAGAGTTT-AAAAAAAAGAGAGTTT-AAAAAAAAGAGAGTTT | Design primers |
| 1051389 | TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA | Design primers |
| 1051592 | TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA | Design primers |
| 1051690 | TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA | Design primers |
| 1056091 | AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT | Design primers |
| 1056449 | CATCCAAT-CATCCAAT-CATCCAAT | Design primers |
| 1228276 | TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC-TGTCTTTTGTTTTTCTTGTTC | Design primers |
| 1287947 | GTTTAAAAAAAAGAGA-GTTTAAAAAAAAGAGA-GTTTAAAAAAAAGAGA-GTTTAAAAAAAAGAGA-GTTTAAAAAAAAGAGA-GTTTAAAAAAAAGAGA-GTTTAAAAAAAAGAGA | Design primers |
| 1290569 | AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT-AAGATTAAAT | Design primers |
| 1350066 | TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG-TATTTATG | Design primers |
| 1397582 | TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA | Design primers |
| 1397652 | TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA-TAAAGAA | Design primers |
| 1402081 | AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT-AAAGCTTTAAATTAAAT | Design primers |
| 1402439 | CATCCAAT-CATCCAAT-CATCCAAT | Design primers |
| 1477700 | GCGTTTTTA-GCGTTTTTA-GCGTTTTTA | Design primers |
| 1477739 | TTTTTAGTA-TTTTTAGTA-TTTTTAGTA-TTTTTAGTA-TTTTTAGTA | Design primers |
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