Microsatellites /Tandem Repeats database

Genome: Mycobacterium sp. MOTT36Y

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
180738GGCGCCTTCTTCGCGGGCGCCTTCTTGGCGGGCGCCTTCTTGGCGDesign primers
301308ACGCCGCGCTTGCGATCGCCG-CGGCCGCGCTTGCGATCGCCG-CGGCCGCGCTTGCGATCGCCGDesign primers
340784CCAAAGCCCGAGCCGAAGCCCGAGCCAAAGCCCGAGDesign primers
795611TTCCTCGGCGGCCTTCTCCTCGGCGGCCTTGTCCTCGGCGGCCTTDesign primers
854713GCGTGACCCACCCCCTACCGCCGAACGTGACCCACCCTCTACCGCCGAGCGTGGCCCACCCCCTACCGCCGADesign primers
1596080CCGCCCCGGACGCCC-CCGCCCCGGACGCCC-CCGCGCCGGACGCCCDesign primers
1605740CGACGACACCGACGACGACTCGGACGACGACTCCGAAGACGACTCGGACGACGATTCCGACGACGACTCGGADesign primers
1696907TCGAGGACACCAATGACGA-CCGAGGACACCAATGACGA-CCGAGGACACCAATGACGADesign primers
2107044GGTGGGCCCGGTGGACCGGGTGGGCCAGGTGGACCGGGTGGGCCCGGTGGACCCDesign primers
2292242GCTCGGGTAGGCGGCTCGGGTAGGCAGCTCGGGTAGCCGDesign primers
2901146GACCCCGAGGAGGATCCCGAGGAGGAACCCGAGGAGDesign primers
3343894CAGGCGCCGTTGCAG-CAGGCGCCGTTGCAG-CAGGCGCCGGTGCAGDesign primers
3880208GGCTAATC-GGCTAATC-GGCTAATC-GGCTAATC-GGCTAATCDesign primers
3911892TCG-TCG-GCG-TCG-TCG-GCG-TCG-TCG-GCGDesign primers
3981969GTCCCAGACCGGCCCAGACCGTCTCAGACCDesign primers
4419025CAGAAAATCACGCGGAAAATCACGCGGAAAATCACGDesign primers
4539235TTGACGACGACGTTGACGACGAAGTTGACGAAGACGDesign primers
4576371CCCGCGTGATTT-TCCGCGTGATTT-TCCGCGTGATTTDesign primers
4582045GGCCAGATCCCGGGGATGGGGGGCCAGATCCCGGGCATGGGGGGCCAGATCCCGGGCATGGCGDesign primers
4930135CGTGGTCGTCGGGGGTGAATACGTCGTCGTCGGGGGCGAATACGTGGTCGTCGGGGGCGAATADesign primers
4930199GTCGTCGTCGGCGGCGAGTACGTCGTCGTCGGCGGCGAATACGTCGTCGTCGGGGGCGAATACDesign primers
4974091TCAAGCCGCCGGAGGTCAAACCGCCGGAGGTCAAGCCGCCGGAGCDesign primers
5094843TTTCCCGCGTCGACCTTTCCCGCGTCGGCCTTTCCCGCGTCGACCDesign primers

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