Microsatellites /Tandem Repeats database

Genome: Listeria monocytogenes strain C1-387

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
624178CCGGTAGATCCGGTAGAC-CCGGTAGACCCGGTAGAC-CCGGTAGATCCGGTAGAT-CCGGTAGATCCGGTAGAT-CCGGTAGATCCGGTAGAT-CCGGTAGATCCGGTAGAT-CCGGTAGATCCGGTAGAT-CCGGTAGATCCGGTAGAT-CCGGTAGATCCGGTAGATDesign primers
1365353GCATCGGCATCAGCGTCGGCATCAGCATCGGCATCTDesign primers
1365677GCATCAGCGTCAGCATCGGCGTCAGCATCAGCGTCGDesign primers
1365797GCATCAGCGTCAGCATCGGCGTCAGCATCAGCGTCGDesign primers
1365869GCATCAGCGTCAGCATCGGCGTCAGCATCAGCGTCGDesign primers
1365917GCATCAGCGTCAGCATCAGCGTCGGCATCGGCGTCADesign primers
1366016TCAGCATCGGCATCCGCATCGGCATCCGCATCGGCADesign primers
1366169GCATCAGCGTCAGCATCCGCGTCAGCATCGGCGTCADesign primers
1366211GCATCAGCGTCAGCATCAGCATCAGCATCAGCGTCGDesign primers
1366250TCAGCATCCGCATCAGCATCAGCATCCGCATCCGCADesign primers
1366292TCGGCGTCAGCATCCGCATCAGCGTCAGCATCCGCATCAGCGTCAGCATCCGCADesign primers
1366493GCATCGGCATCCGCATCCGCATCCGCATCGGCATCADesign primers
1366667GCATCAGCGTCAGCATCCGCGTCAGCATCAGCGTCADesign primers
1366709GCATCAGCGTCAGCATCCGCGTCAGCATCAGCGTCADesign primers
1366763GCATCC-GCATCC-GCATCC-GCATCCDesign primers
1366823GCATCC-GCATCC-GCATCC-GCATCCDesign primers
1367117GCATCG-GCATCC-GCATCC-GCATCC-GCATCC-GCATCCDesign primers
1367249GCATCG-GCATCC-GCATCC-GCATCC-GCATCC-GCATCCDesign primers
1367309GCATCC-GCATCC-GCATCC-GCATCCDesign primers
1367363GCATCAGCGTCA-GCATCAGCGTCA-GCATCGGCGTCA-GCATCGGCGTCADesign primers
1367462TCGGCGTCAGCATCCGCA-TCAGCGTCAGCATCCGCA-TCAGCGTCAGCATCCGCA-TCAGCGTCAGCATCCGCA-TCAGCGTCAGCATCCGCA-TCAGCGTCAGCATCCGCADesign primers
1885654TCTGTTGTTCGTTTGTTGTTCGTCTGTTGTTCADesign primers

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