Microsatellites /Tandem Repeats database

Genome: Pyrococcus furiosus DSM 3638

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
39605GAGGAAGAAGATGAGGAAGAAGAGGAGTACGAAGATDesign primers
39690CTCTC-TTCTC-CTTTC-CTTTC-TTCTC-CDesign primers
63436CCTTATCTGCTCTTCTCTGCCCATATCTGCCDesign primers
66230CTT-TTC-CTT-CTT-TTT-CTT-CTT-TTT-CTTDesign primers
98542CTT-TTC-TTC-CTC-TTC-TTC-CTC-TTC-TTCDesign primers
274603AGAACAAGGACAAGAAGAAGAAAADesign primers
467942CCTTTTTCTTTTCCTTGTCTTTTTCCDesign primers
515205GAAGAAAAGAGAACAGAAGGGGAGADesign primers
603643ATATCACCTGATATATCAATTGATATATCAACTTATADesign primers
829630TTTTTATTTTTTCATTTTTATATTDesign primers
829711TGTTTTTTGTGTGGTTTTTTGTTTTTTTTTTTGTTTDesign primers
1099490TTTAATTA-TTTAATTA-TGTAATTA-TTDesign primers
1167595GGTGTGGGAGTTGGCGTTGGAGTTTGTGAGGGAGTTGGDesign primers
1168011TGT-GGT-TGT-GGA-TGT-TGT-TGT-CGTDesign primers
1649543AAACAACAACAATAACAAAAACAGAAADesign primers
1793375CTCCTCTTCCCACTCTTCGTCCCAATCTTCTTCCCADesign primers
1797167AAGAAAAGAAAAAGAAAGAAGAGAAAAAAADesign primers
1843453AGGAGAAGAGAAGAAAGAAGAGGAAAAGAAGGAAGAAGAGGAGAADesign primers

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