Microsatellites /Tandem Repeats database

Genome: Streptococcus equi subsp. zooepidemicus

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
250701AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-AT-ATDesign primers
621565TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCAT-TGGTTTAGGCTCAGGCTTAGGCATDesign primers
621719TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGCDesign primers
621809TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGC-TTAGGCTGAGGTTCCGGCDesign primers
1271458TGGCTTAGGCAT-TGGCTTAGGCAT-TGGCTTAGGCATDesign primers
1271495GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATT-GGCTCTGGCTTAGGCATTDesign primers
1271735GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTA-GGCTCTGGCATTGGCTTADesign primers
1503592CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATG-CTTCCATGDesign primers
1550118AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AA-AADesign primers
1674504AACCTGAGCCTAAGCCAG-AACCTGAGCCTAAGCCAG-AACCTGAGCCTAAGCCAGDesign primers
1830801CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAG-CCTAAGCCAGAGDesign primers

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