Microsatellites /Tandem Repeats database

Genome: Thermococcus barophilus MP

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
5004GA-GA-AA-TA-GA-AA-AA-TA-AA-GA-AA-TADesign primers
154741AGGAGGAAGAAGAGGAGGAAGCATCTGAGGAAGAAGDesign primers
155095AGG-AAG-AAG-AGG-AAG-AGG-AGG-AAG-AAGDesign primers
575478AGAAAAGAAAAGAAAAGATGGGAGAAGAAADesign primers
1217145GTCGTG-GTCGTG-GTGGTG-ATCGTGDesign primers
1345279TGGGATTTCTTGAGCTTTCTTGAGCTTTCTDesign primers
1477982TGGTGATGGGCTTGGTGATGGAGATGGGGTCGGTGATGGTGACGGACTTGGAGADesign primers
1565592GAAGAGTGGGAGGAGGATTGGGAGGAAGAATGGGAADesign primers
1568781AATCACAATCGCCATCACAATCAADesign primers
1630679TTTGGTACGCTTTGGCAAGCCTTGGCACGCDesign primers
1673750AAGAGCTTGAAGAGTTTGAAGAGCTTTDesign primers
1740270TTTTAAAATTTTTAAATTTAAAAADesign primers
1754436TAGATAGATAGGTAGATAGATATADesign primers
1756280CCTTTCTGAACTTTTCTGGACGTTTGTGAADesign primers

Please help us improve this resource by reporting problems, suggestions etc.