Microsatellites /Tandem Repeats database

Genome: Bacillus thuringiensis serovar finitimus YBT-020

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
400954ACAAAA-AGAAAA-AGAAAA-AGAAAA-AGAAAA-AGAAAADesign primers
527635CCATTGCCACCCGAACCATTGCCACCAGAACCATTGCCACCAGAADesign primers
527695CCATTGCCACCAGAACCGTTGCCACCAGAACCATTGCCACCAGAADesign primers
527872GAGCCATTGCCACCCGCGCCATTGCCACCCGAGCCATTGCCACCADesign primers
709314AAATAAAAAGAAAATAAAACGAAAATAAAACGADesign primers
887039AAAT-AAAT-AAAT-AAAT-AAAT-AAATDesign primers
1739856TAGTATTT-TAGTATTT-TAGTATTTDesign primers
1763973AAAAGTTCTTAAAAGCTCTTAAAAGCTCTTDesign primers
2233803AACAGGAGGAACTGG-AACAGGAGGAACTGG-AACAGAAGGAACTGGDesign primers
2233944AAAACC-AAAACC-AGAACC-AAAACC-AGAACC-AAAACCDesign primers
2447541GCCTGTGGGACCAGTGATGCCTGTAGGACCAGTGATGCCTGTAGGACCAGTGATDesign primers
2448231GGGAACAAC-GGGAACAAC-GGGAACAACDesign primers
2448672GGGAACAAC-GGGAACAAC-GGGAACAACDesign primers
2450421CAACAGGAG-CAACAGGAG-CAACAGGAGDesign primers
2450502CAACAGGAG-CAACAGGAG-CAACAGGAGDesign primers
4015357TGTTCTTTT-AGTTCTTTT-AGTTCTTTT-AGTTCTTTT-AGTTCTTTT-AGTTCTTTT-AGTTCTTTT-AGTTCTTTTDesign primers
4539679TTG-TTG-GTG-TTG-TTG-GTG-TTG-TTG-GTGDesign primers
4539752TGGTGACCT-TGGTGACCT-TGGTGACCTDesign primers
4712044CGGCTCTTT-CGGCTCTTT-CGGCTCTTT-CGGCTCTTTDesign primers

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