Microsatellites /Tandem Repeats database

Genome: Mycobacterium abscessus subsp. bolletii 50594

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
40161ATATCACTGC-ATATCACTGC-ATATCGCTGCDesign primers
1066986CGGGCGGCAGATAG-CGGGCGGTAGATAG-CGGGCGGTAGATAG-CGGGCGGTAGATAGDesign primers
1588629GGAACAGG-GGAACAGG-GGAACAGGDesign primers
1614431AGCAGCAAG-AGCAGCAAG-AGCAGCAAGDesign primers
1702022GCCTTGGGCGGTCTTGGGCGGTCTTGGGCGDesign primers
1909330ACTTCTCGTCCT-TCTTCTCGTCCT-TCTTCTCGTCCTDesign primers
1960777CAGGAG-CAGGAG-CAGGAG-CAGGAGDesign primers
3066294GTTGTATCCCTCGGTTGTATCCCTGGGTTCTATCCCTCGDesign primers
3267387CCTTCTTGGCCGGAGCCTTCTTGGCCGGGGCCTTCTTGGCCGGAGDesign primers
3368805CCGCGCCGCGAGCACCGCACGCCGCACCGCGAGTACCGCACGCCGCACCGCGAGTACCGCACGDesign primers
4089557GCCTTCTTGGCGGGGGCCTTCTTGGCCGGGGCCTTCTTGGCCGGGDesign primers
4203996GCTGCC-GATGCC-GATGCC-GATGCC-GATGCC-GATGCCDesign primers
4341110TTACCCGCCAACCCAGCGTTACCCGCCAACCCAGCATTGCCCGCCAACCCAGCGTTACCCGCCAACCCAGCGTTACCCGCCAACCCAGCADesign primers
4341201TGCCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCGT-TACCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCAT-TGCCCGCCAACCCAGCGTDesign primers

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