Microsatellites /Tandem Repeats database

Genome: Streptococcus suis T15

Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
496899TTGTTTTTTCTTTGTTTTTCGTATGTTTTTTCADesign primers
626315AAAACCTTGGAAAAAGGTTGGAAAATCCTTGAADesign primers
857031ACTTTGATTTTGACTTTCAATTTGDesign primers
904102GAAAAAAATAAACAAAAATAAAACAAAATADesign primers
916991TAAGTGTTGTTAAGCGTTGTAAGGTGTTGTDesign primers
1321318CAAGC-TTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTG-CTCTGDesign primers
1375817TGCTTCTGCTTTCGCTTCTTCTTCDesign primers
1444329AATAAATTTAACAAAATTTAACAAAATTTADesign primers
1606169ATACAGTAGAAAACAGTAAAATACAGTAGADesign primers
1661686CTACTGTATTTTACTGTGTTTTACTGTATCDesign primers
1683024TATTTATATATATATATTTTTATADesign primers
1712924TTCTTTTTCTGTTGCTTTTTCTTCDesign primers
1918984TCTTCCTCTTGCTCTACCTCTTCCDesign primers
1929066CGTTTTCTTAACGATTTCCTAACATTTTCTTAADesign primers
1935222TCTCAACTAATTTCAAGTAATTTCATCTAADesign primers
2037945GTAGTTGTTTCTTCTGAAGTTGTTGTTTCCTCAGAAGTTGTAGTCTCTTCTGAADesign primers

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