Microsatellites /Tandem Repeats database

Genome: Tsukamurella paurometabola DSM 20162

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
190552CCGCGTCCCCAGCCGCTCGCC-GCGCGTCCCCAGCCGCTCGCC-GCGCGTCCCCGGCCGCTCGCCDesign primers
264008CTGACA-CTGACA-CTGACA-CTGACADesign primers
379201AGCCCGCGGCCAAGACCGATGGCG-CGCCCGCGGCCAAGACCGATGGCG-CGCCCGCGGCCAAGTCCGATGGCGDesign primers
833350GGCTTCTGGGCAGCGGGCTTCTGGGCGGCGGGCTTCTGGGCGGCGDesign primers
900282GCCGATAAGGCCGCGGCGGATAAGGCCGCGGCGGATAAGGCCGCGDesign primers
1043801GGTCCTACTGAC-CGTCCTACTGAC-CGTCCTACTGACDesign primers
1185193CTGCAGTGCCGCCAA-CTGCAGTGCCGCCAA-CTGCAGTGCCTCCAADesign primers
1265948GCGCCGAAGAACGAC-GCCCCGAAGAACGAC-GCCCCGAAGAACGAC-GCCCCGAAGAACGACDesign primers
1342407CGATCCTGCCGAGCTGCT-CGATCCTGCCGAGCTGCT-CGATCCTGCTGAGCTGCT-CGATCCCGCCGAGCTGCTDesign primers
1539245CGTCGC-CGTCGC-CGTCGC-CGTCGCDesign primers
1677628CGGTGCCGACCCCGC-TGGTGCCGACCCCGC-TGGTGCCGACCCCGCDesign primers
2018493GCGCGAGCGGCACACGAAGTGCGAGCGGCACACGAAGTGCGAGCGGCACACGAADesign primers
2330706CGGCTCGGCGGT-CGGCTCGGCGGT-CGGCTCGGTGGTDesign primers
3172122GCCCCTAGCGGGAGAGCGACGGTGCGTCCCTCGCGGGAGAGCGACGGTGCGTCCCTCGCGGGAGAGCGACGGTGCDesign primers
3383573CGACGGACTCACCCTCACGGGCGGCATCGGACTCACCCTCACGGGCGGCATCGGACTCACCCTCACGGGCGGDesign primers
4094265CCATGTCCGGCCACACGATGTCCGGCCACACGATGTCCGGCCACADesign primers
4159587CGCGGCGGGATCGAG-CGCAGCGGGATCGAG-CGCAGCGGGATCGAG-CGCGGCGGGATCGAGDesign primers
4216134CCGCAAGACCGCGCAAGACCCCGCAGGACCDesign primers

Please help us improve this resource by reporting problems, suggestions etc.