This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Percentaje of mismatches allowed within the tandem repeats:
0 |
0.1 |
0.2
| Position | Sequence | |
| 60368 | CCAGACATCATTGACCATACC-CCAGACATCATTGACCATACC-CCAGACATCATTGACCATACC | Design primers |
| 60432 | CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT-CAGACATCATTGACCATACCT | Design primers |
| 604598 | GAGGACTTACCCTAATCATCTT-GAGGACTTACCCTAATCATCTT-GAGGACTTACCCTAATCATCTT-GAGGACTTACCCTAATCATCTT | Design primers |
| 994529 | CCATCAGCG-CCATCAGCG-CCATCAGCG | Design primers |
| 1117723 | ATTTAAACGGG-ATTTAAACGGG-ATTTAAACGGG-ATTTAAACGGG-ATTTAAACGGG-ATTTAAACGGG-ATTTAAACGGG-ATTTAAACGGG | Design primers |
| 1210019 | CTCCAGACCAAACTAGTTCAC-CTCCAGACCAAACTAGTTCAC-CTCCAGACCAAACTAGTTCAC-CTCCAGACCAAACTAGTTCAC | Design primers |
| 1944658 | CTCCAGACCAAACTGGTTCAC-CTCCAGACCAAACTGGTTCAC-CTCCAGACCAAACTGGTTCAC | Design primers |
| 1949197 | CTTTTACCAACC-CTTTTACCAACC-CTTTTACCAACC | Design primers |
| 2677584 | CCTCCTGATGGGTATGGGAACT-CCTCCTGATGGGTATGGGAACT-CCTCCTGATGGGTATGGGAACT | Design primers |
| 2827605 | TCA-TCA-TCA-TCA-TCA-TCA-TCA-TCA-TCA | Design primers |
| 2928623 | AGTTCACCTCCAGACCGAACT-AGTTCACCTCCAGACCGAACT-AGTTCACCTCCAGACCGAACT-AGTTCACCTCCAGACCGAACT-AGTTCACCTCCAGACCGAACT | Design primers |
| 3247133 | AGTTATGTCTGGAAGTAAACT-AGTTATGTCTGGAAGTAAACT-AGTTATGTCTGGAAGTAAACT-AGTTATGTCTGGAAGTAAACT-AGTTATGTCTGGAAGTAAACT | Design primers |
| 3247336 | GTAAACTAGTTAGGTCTGGCG-GTAAACTAGTTAGGTCTGGCG-GTAAACTAGTTAGGTCTGGCG | Design primers |
| 3388119 | GATGTAGATGCT-GATGTAGATGCT-GATGTAGATGCT | Design primers |
| 3529318 | GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG-GAGGTGAACCAGTTCGGTCTG | Design primers |
| 3551237 | TGGAGGTGAACTAGTTCGGTC-TGGAGGTGAACTAGTTCGGTC-TGGAGGTGAACTAGTTCGGTC-TGGAGGTGAACTAGTTCGGTC | Design primers |
| 3642925 | TCTCTG-TCTCTG-TCTCTG-TCTCTG | Design primers |
| 3729228 | TGAAGCAGTTCGGTCTGGAGG-TGAAGCAGTTCGGTCTGGAGG-TGAAGCAGTTCGGTCTGGAGG-TGAAGCAGTTCGGTCTGGAGG-TGAAGCAGTTCGGTCTGGAGG-TGAAGCAGTTCGGTCTGGAGG | Design primers |
| 3729365 | GGTCTGGAGGTGAAGCAGTTC-GGTCTGGAGGTGAAGCAGTTC-GGTCTGGAGGTGAAGCAGTTC-GGTCTGGAGGTGAAGCAGTTC-GGTCTGGAGGTGAAGCAGTTC | Design primers |
| 3741044 | GTTCGGTCTGGCGGTGAACTG-GTTCGGTCTGGCGGTGAACTG-GTTCGGTCTGGCGGTGAACTG-GTTCGGTCTGGCGGTGAACTG | Design primers |
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