Microsatellites /Tandem Repeats database

Genome: Chlamydophila pneumoniae LPCoLN

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
61560TTTTTTTTGTTTATTTTTATTATTTDesign primers
108576TGAATCTCTAGAAGAAACTCTAGAAGAAACTCTAGADesign primers
179296GGTCCTTCAGGTCCTTCGGCTCCTTCADesign primers
219456CGGAGCCGGAGAAGGAGCCGGAGCCGGAGGDesign primers
328512GGTGTAGGTGGAGGTGTAGGTGCADesign primers
463979TTTTTTTTGTTTTTGTATTTTTTATDesign primers
604375CTTTTATTTTCTTTTTTTTTCCTTTDesign primers
622395GGTGGTGTTGGTGGTGGAGGTGTTDesign primers
635184ACCCAAACCACCAAAACCACCCAAACCDesign primers
661946CCTCCTGTAACTGCTCCGGCCTCTGTAACTGCTCCGGCTCCTGTAACTGCTCCGDesign primers
1165244CGATAAAAATCGATAAAGAACGAGAAGAATDesign primers
1185054ATCTAAACCTAAATTTAAATCTATDesign primers

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