Microsatellites /Tandem Repeats database

Genome: Oenococcus oeni PSU-1

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
55035TTAATGTATC-TCCCGGTATC-TCCCGGTATC-TCCCGGTATC-TCCCGGTATC-TCCCGGTATCDesign primers
114122CTCGGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTG-TTGAGCTTGDesign primers
165588ACTAAT-ACTAAT-ACGAAT-ACAAATDesign primers
224601GGTTATTGGTCT-TGTTATTGGTCT-TGTTATTGGTTTDesign primers
260075CTTTAATC-ATTTAATC-ATTTAATC-ATTTAATCDesign primers
415325GCAGCAGCAGCTCCAGCAGCAGCGDesign primers
428358TTCTTTTATCTTCGTTTTATCTCTCTTTTATTTDesign primers
452917TTTTTTGGAATTTTTTTAAATGTTTTTGAADesign primers
684886TAAAAGTTGAAAAAGTTGTAAAAGTAGDesign primers
752278CGACTTCTACTTCTACTTCGACTGDesign primers
771684AAATTTAAACTTAATTTTAAATTCDesign primers
810602TTTTTATTTTCTTTTAATTTTTCTTTTATGTTCDesign primers
903327TTTTTAATTTTTTTATTATTTAATDesign primers
1134956AGTCGA-AGTAGA-AGTAGA-AGTAGADesign primers
1233857TTTTAATTTTATTTTTTAATTTAADesign primers
1331964CTTCAGCTTCGGCTTCAGCTTCGGCTTCGGDesign primers
1381590TTTTTATTCGTTTTTTTTCGTCTTTAATCGDesign primers
1405636AAATTCAAGAAAACTCAAAAAAATAAAAGADesign primers
1415817TT-TT-TT-TT-AT-TA-TT-TT-TT-TC-TT-TC-TDesign primers
1422258ATAGCC-ATAGCC-ATAACC-GTAGCC-ATAACCDesign primers
1485056AAAAAATAAAAAAATAATAAATAAADesign primers
1660362ACTCTAATCC-CTTCTAATCC-CTTCTAATCCDesign primers
1664757GCAAAAAAAAAAAAAAAAAAACAAGAAAAADesign primers
1685609GTTTACTTTTAAACGTTGATTTTTAAACGTTTACTTTTAAACDesign primers

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