Microsatellites /Tandem Repeats database

Genome: Lactococcus lactis subsp. cremoris A76

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
193855AATAAGAAACAATTAAAAACAATAACAAGCDesign primers
218874TTAATAAAAAATAAGAAAAATGAATAAATADesign primers
259086AAAGT-AAATT-AAATT-AAAGT-AAAGTDesign primers
547045AAATTATATTA-TAATTATATTA-TAATTATTTTADesign primers
549938TTAAAAAGTTACTG-ACAAAAAGTTACTG-ACAAAAAGTTACTGDesign primers
630446AGAGATAGAGTTAGAGAAAGAGAAAGATATAGAGTTDesign primers
665332TAAAA-TAAAA-TTAAA-TAAAA-TAAATDesign primers
740667TT-TT-TT-TT-AT-TT-TT-TT-TT-CT-TT-CT-TDesign primers
866857AAATAAAA-AAATAAAA-AAATGAAADesign primers
1061931GGATCTGGATCGGGTGTA-GGATCAGGATCAAGTGTA-GGATCAGGATCAGGTGTA-GGATCTGGGTCTGGTGTA-GGATCTGGGTCTGGTGTA-GGATCTGGGTCTGGTGTA-GGATCTGGATCAGGTGTADesign primers
1096497CAAAATCAAAAACTAAATCAACATDesign primers
1126428ATTTTTTTT-ATTTTTTTT-ATTATTTTTDesign primers
1177599CCAGTTGAACCTGTATCTCCAGTAGATCCAGTATCTCCCGTTGAACCTGTATCADesign primers
1378436GAAACTTACAAT-CAAACTTACAAT-CAAACTGACAATDesign primers
1384824ATATAAAA-ATATAAAA-ACATAAAADesign primers
1430773CTTATTATTATTCTTCTTCTCATTDesign primers
1831671TT-TT-TT-CT-TT-TT-CT-TA-TT-TT-TG-TT-TT-TC-TTDesign primers
1882197TAAAATTTTTATAAAATCATTATAAAAATTTTTDesign primers
2002180ATTATTATTTGATTTATTAATTGATTTATTAGTTGADesign primers
2062467ATATATTTAAAACATGTTTTTAAAACATGTTTTTAAAACDesign primers
2112823ACAAGTTTTATAAGTTTTATAAGTTTTDesign primers
2227089ATATAAATACAAATTTAAATATATDesign primers
2312524CTTAAATTATTTTAAATTTTCTAAATTTATDesign primers
2391999GATGGA-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTT-GGTGTTDesign primers
2398930AGAATTGATACCAAGAATTGATAACGAGCATTGATAACADesign primers
2452438TTTTTTTATTATTTTTTTATTTTCTDesign primers

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