Microsatellites /Tandem Repeats database

Genome: Corynebacterium diphtheriae

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
12919AGGCGGATGTGGGCGGATATGGGTGGATGTDesign primers
34030TCGCCCACCA-GTGCCCACCA-GTGCCCACCA-GCGCCCACCADesign primers
82837TTGGCGCTGGCGTTGGCTATGGCGTTGDesign primers
100295AGTTGTTTCGAGTTGTTTTAAGTTGTTGGGDesign primers
101147GTAGTTGTTTTAAGTTGTTTCGAGTTGTTTDesign primers
222982CCAGAGCCCAAGCCGGAACCCAAGCCCGAGCCCAAGCCDesign primers
234099CGCGCCCACCAACGCCCACCAGCGCCCACCDesign primers
239027TGCCCATGGCCATGCGCATGCTCADesign primers
263477AGTAACTTTGTAACTTAGTAACTTDesign primers
400409GTTGCTGCTGCAGGTGCTGCTCCAGCTGCTGCTGAAGDesign primers
573803CTGGAAGGCATGGAAGGCGTGGAAGGCDesign primers
608072ACGATCTACACGATCTTCACGATCTTCDesign primers
610372CACAGCCGCACGGCCGCACAGCAGCDesign primers
744981TGTTGTGGTTGTTGTGTTTGTTGTTGTDesign primers
865102GTGGCGGTGGTGATGGCGGTGGTGDesign primers
978927TGGCGTTGGTGGGCGCTGGTGGGCGCTGGTDesign primers
983566CGA-CGA-CGA-AGA-CGA-AGA-CGA-GGADesign primers
1022137CGAGCGTGGGGAGCGTGGCGATCGTGGDesign primers
1022171AACCGTCGTAATCGTCGTAATCGTCGTDesign primers
1171941TGTTGTGGTTGTTGTGTTTGTTGTTGTDesign primers
1460790GGCGGCGGCTGCGGCGGTGGCGGCGGCTGCGGTGGCGGDesign primers
1498941GTGCTGCTGGCTTAGGCGCAGCTGGTTTAGGAGCCGCAGGCTTAGGDesign primers
1601576CCACACAGAGGCCACAAAGGGGCCACACAAAGGDesign primers
1744585GGTGGCTTCGGCGGTGGCTTCGGAGGCGGTTTCGGCGGTGGCDesign primers
1816410CAGGCGCAGGGGCAGGCGCAGGCGDesign primers
1966521TGTGGAATAACGTGAAATAACGTGGAATAADesign primers
1997948GCGCACCCACCAGCACCCACCAGCACCCACDesign primers
2035707CCCACCAGCG-CCCGCCAACG-CCCGCCAACG-CCCACCAGCG-CCCDesign primers
2049326TTGCAGGGG-TCGCAGGGG-TCGCAGGGG-TTGCAGGDesign primers
2086729GGCTCGAATAACCCCAAGCTCCCGAATAACCCCAAGCTCCCGAATAACCCCAAGDesign primers
2157479GGCGCTGGTGGGCGTTGATGGGTGCTGGTGGGCDesign primers
2157867CCAGTAAAGCCGAGTAATGCCGAGTAATGCCDesign primers
2197975CGCAGCAGTACCACCAGCAGCAATACCTCCTGCGGCAGTACCTCCDesign primers
2342753CTTCGGCTGCGGCTGCGGCTTGGGDesign primers
2366265GCGGCTGCGGGCCCTGCTGCGGGCCCTGCTGCGGGCGDesign primers
2378398GCAGCCGAAGCCACAGCCGCTGCCGCDesign primers
2419155GCTCACGCACC-CCTCACGCACC-CCTCACGCATCDesign primers
2440293GGT-GCT-GCT-GGT-CCT-GCT-GGT-GCT-GCT-GDesign primers
2445352CGCCCACCAA-CGCCCACCAA-CGCCAGCCAADesign primers
2468935CCCCAGCGCTGCAGCACCACACAGCGCTGCAACACCACACAGCGCTGCAGCACCDesign primers

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