Microsatellites /Tandem Repeats database

Genome: Ralstonia solanacearum PSI07

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
2154CATTC-TGGTC-TGGTC-TGGTC-TGGTC-TGGTC-TGGTC-TGGTC-TGGTCDesign primers
76914GCCGGTGCCGCTGTCGGTGCCGCTDesign primers
86064CGTCGAAGCCGTCGATGCTGTCGAAGCDesign primers
97804GCCGGT-GCAGGT-GCAGGT-GCAGGTDesign primers
188078GACCAGGACAAGGACGAGGACAAGDesign primers
262079GCAGCCGCTGCCGCAGGCGCTGCCDesign primers
268472GTGCTGATGCTGGTGCTGCTGCTGDesign primers
391711TCA-TCA-TCA-CCA-TCA-CCA-GCA-TCADesign primers
398093TAGCTA-CAGCTA-CAGCTA-CAGCTADesign primers
408109GGCCAGAACGGCCAGAATGGACAGAACDesign primers
431725TGCTGCTGCTGGTGGTGCTGCTGTDesign primers
431838CTGTTC-CTGTTC-CTCTTC-CTGTTCDesign primers
553434GGTAT-GGCAT-GGCAT-GGCAT-GGCATDesign primers
566680ACAGCGGCTACGGCAGCGGGTACGACAGCGGCTACAACAATGGCTACGGCAGCGGCTACGDesign primers
586979GCCAGCAGCGCCAGCAGTGCCAGCGGCDesign primers
602957GCGTCTATT-GCGTCTATT-GTGTCTATTDesign primers
628687CCTATA-CCCATA-CCCATA-CCTATADesign primers
646773CGGTCAGTGCCAGTCAGCGCCAGTCCGTGCCAGTCAGTTCDesign primers
659424TGGTGC-TCGTGC-TCGTGC-TCGTGCDesign primers
659449CGTGAC-CGTGAC-CGTGAC-CGTGATDesign primers
667981GGGCTTCAGGGTTTCAGGGCTTCADesign primers
747712CCGACGCAGTGCCGCCGCAATGACGGCGCAGTGDesign primers
756414ATCGCCGCATGGCCGCATCGCCGGDesign primers
835305GCGCCA-GCGCCA-GCTCCA-GGGCCADesign primers
838875GCATCGGCCGCAGCATCACCTGCGGCGTCGGCCGCAACGTCACCTGCTGCGTCAGCCGCAACGTCACCTGCGDesign primers
886014ATTCTTCGATCCTTCGATTTTTCGDesign primers
904157GCTGCTGATGCTGCTGTTGCTGGTDesign primers
904942GCATGCCG-TCATGCCG-TCATGCCGDesign primers
911011GCCACC-GCCACC-GCCGCC-GCAACCDesign primers
927783CTGGCGTTGGCGTTGGCGCTGACGDesign primers
948523CGAGAAGCTGGTGCCCGAGCGCCTGGTGCCCGAGAAGCTTGCCCCDesign primers
977692CATCGGAGGCGTCGGAGGCGTCGGAGGDesign primers
995256ACG-ACG-ACG-AAG-AGG-ACG-AGG-ACG-AGG-ACGDesign primers
995291GAAGAGGACGAGGAAGACGAGGAGDesign primers
1005637CCGCCAGCA-CCACCAGCA-CCACCAGCA-CCACCAGCADesign primers
1005677CACCAGCACCGCCAGCACCGCCAGCACDesign primers
1005974CGTTGGCGTTGGGGTTGCCGTTGGCGTTGGCATTGCDesign primers
1019038CATCGC-CAGAGC-CAGAAG-CAGAGC-CAGAAG-CAGAGC-CAGAAG-CAGAGC-CAGAAG-CAGAGC-CAGAAG-CAGAGCDesign primers
1019111AGAAGC-AGAGCC-AGAAGC-AGAGGC-AGAGGC-AGAGGC-AGAGGC-AGAGGCDesign primers
1047277CCTGATGCCCTGGACCTGACACCCTGGATCTGATGCCCTGGCDesign primers
1059764GGGCCTGGCCCTGAGCCTGGGGCTDesign primers
1114139GCGCC-ACGCC-ACGCC-ACGCC-ACGCCDesign primers
1196443GTCACTCCCGAGGTCACTACAGAGGTCACTACTGAGDesign primers
1254689CGGTGGCGGCGGCCGTGGCGGCGGDesign primers
1259819GCCAGATGTGCCAGACGTGCCAGATGTDesign primers
1306321GCGGCGGCGGTGGTGGCGGCGGTGDesign primers
1388048TTACTACATTAACTACATTTACCACATDesign primers
1442106AAGCCGAGCGGCAGGCCGAGCGGCAGGCCGAGCGCCDesign primers
1460924CGGCAATGG-TGGCAATGG-TGGCAATGGDesign primers
1490600GCCGCGGCCTCGGGCGCGGCCGTGDesign primers
1557160GGCCTC-GGGCTC-GGGCTC-GGGCTC-GGGCTCDesign primers
1642227CGTTGTGGTTGTGGTTGTCGATGTDesign primers
1667805GCCGGG-TGCGGG-TGCGGG-TGCGGG-TGCGGG-TGCGGGDesign primers
1689652CGGCGCCTGCGCGGGCGCCGTCGCDesign primers
1753680CAATCTCC-CGATCTCC-CGATCTCC-CGATCTCCDesign primers
1981133CGCTGGCCGCATCGCTGGCCGCGCTGCTGGCCGGATDesign primers
2018401TTCGCCGTCGCCTTCGCATTCGCGDesign primers

Please help us improve this resource by reporting problems, suggestions etc.