Microsatellites /Tandem Repeats database

Genome: Bacillus anthracis str. H9401

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
202548TAATTATAACTAAATATAACTAAATATAACDesign primers
871434CCAGGCGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCGGGTGAAGAAACAGAAAAG-CCAGGCGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAG-CCAGGCGAAGAAACAGAAAAG-CCAGGTGAAGAAACAGAAAAGDesign primers
1174142TCCAGTTGGCCCAGTTGGTCCAGTTGGTCCAGTTGGTCCAGTTGGCCCAGTTGGDesign primers
1451556TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TAT-TATDesign primers
2172526TAAAGATAAGTAAAGAGAAGTAAAGAGAAGDesign primers
2270446GCCTGTGGGACCAGTGATGCCTGTGGGACCGGTGATGCCTGTAGGACCAGTGATDesign primers
2578849AATTCCAATTACAATTCCAATCACAATTCCGATTACDesign primers
2880616ATTTTTTATTTGGTTTTTTATTTGGTTTTTTATTTGDesign primers
3152064AAGAATCTGTTC-AAGAATCTGTTC-AAGAATATGTTCDesign primers
3505587GGACCTACT-GGACCTACT-GGACCTACTDesign primers
3510922TCTTCTTTTTCA-TTTTCTTTTTCA-TTTTCTTTTTCA-TTTTCTTTTTCADesign primers
3886589AACATTTTTTGAACATTTATTGAACTTTTTTTGDesign primers
4094137ACAGCAATATCA-ACAACAATATCA-ACAACAATATCA-ACAACAATATCADesign primers
4322990GTTGCTCCT-GTTGCTCCT-GTTGCTCCTDesign primers
4342598CATCTGGTTTTTCTA-CTTCTGGTTTTTCTA-CTTCTGGTTTTTCTA-CTTCTGGTTTTTCTADesign primers
4509737CTCCCGTTT-CTCCCGTTT-CTCCCGTTTDesign primers
4518815TTGTTGATA-TTGTTGATA-TTGTTGATADesign primers
4590056AAGGTATAGAAC-AAGGTATAGAGC-AAGGTATAGAGC-AAGGTATAGAAC-AAGGTATAGAAC-AAGGTATAGAACDesign primers
4955941AATTT-TATTT-TATTT-TATTT-TATTT-TATTTDesign primers

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