Microsatellites /Tandem Repeats database

Genome: Corynebacterium terpenotabidum Y-11

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
166570TAGGTCCC-TAGGTCCC-TAGGTCCCDesign primers
195351GGCGGGAGGT-GGCGGGAGGT-GGCGGGAGGTDesign primers
234941CGGCGTCCC-CGGCGTCCC-CGGCGTCCCDesign primers
390682CCAGGGCGG-CCAGGGCGG-CCAGGGCGG-CCAGGGCGGDesign primers
391532ATGGAGATGCCGGAGGGT-ATGGAGATGCCGGAGGGT-ATGGAGATGCCGGAGGGT-ATGGAGATGCCGGAGGGT-ATGGAGATGCCGGAGGGTDesign primers
407354GGTCCTGCTG-GGTCCTGCTG-GGTCCTGCTG-GGTCCTGCTGDesign primers
513684GTCGGCGTG-GTCGGCGTG-GTCGGCGTG-GTCGGCGTGDesign primers
644722CAGCGGTTCGGG-CAGCGGTTCGGG-CAGCGGTTCGGGDesign primers
687698TGGACGCTG-TGGACGCTG-TGGACGCTGDesign primers
767285TCGGCACC-TCGGCACC-TCGGCACCDesign primers
776862CCGGCACCAA-CCGGCACCAA-CCGGCACCAADesign primers
798190GGGCCTATCC-GGGCCTATCC-GGGCCTATCCDesign primers
799515GTACCTCC-GTACCTCC-GTACCTCC-GTACCTCCDesign primers
803323GGGGCAGGC-GGGGCAGGC-GGGGCAGGC-GGGGCAGGC-GGGGCAGGCDesign primers
833552GGGTCAGCTTGCC-GGGTCAGCTTGCC-GGGTCAGCTTGCCDesign primers
851319GGGGACCGG-GGGGACCGG-GGGGACCGGDesign primers
874584GCCGGA-GCCGGA-GCCGGA-GCCGGADesign primers
1105947CACCCCTGATT-CACCCCTGATT-CACCCCTGATTDesign primers
1120479CGACTGGCAG-CGACTGGCAG-CGACTGGCAGDesign primers
1261835GGGGAGGGACG-GGGGAGGGACG-GGGGAGGGACGDesign primers
1261878GGGGAGGGAC-GGGGAGGGAC-GGGGAGGGACDesign primers
1291949CACTTCCGCGCGCGGCGCTGTGT-CACTTCCGCGCGCGGCGCTGTGT-CACTTCCGCGCGCGGCGCTGTGT-CACTTCCGCGCGCGGCGCTGTGTDesign primers
1316875CCGTCGGCA-CCGTCGGCA-CCGTCGGCADesign primers
1374966CGGTATCAG-CGGTATCAG-CGGTATCAGDesign primers
1413398TTTCCCTGC-TTTCCCTGC-TTTCCCTGCDesign primers
1449745TTCTGCTGAG-TTCTGCTGAG-TTCTGCTGAGDesign primers
1457631CTGGTCCGGGCA-CTGGTCCGGGCA-CTGGTCCGGGCADesign primers
1475370GACCTCCAC-GACCTCCAC-GACCTCCACDesign primers
1475398ACCGCCACG-ACCGCCACG-ACCGCCACGDesign primers
1542099GCAGCCTCCCGCACA-GCAGCCTCCCGCACA-GCAGCCTCCCGCACADesign primers
1546320GGTGCGGGT-GGTGCGGGT-GGTGCGGGTDesign primers
1585447TAACCCTGGCTG-TAACCCTGGCTG-TAACCCTGGCTGDesign primers
1649910CCTCGGCGA-CCTCGGCGA-CCTCGGCGADesign primers
1654367CAGTGCCGCGC-CAGTGCCGCGC-CAGTGCCGCGC-CAGTGCCGCGCDesign primers
1654412AGTGCCGCGCC-AGTGCCGCGCC-AGTGCCGCGCCDesign primers
1678611CCCGGCCCA-CCCGGCCCA-CCCGGCCCADesign primers
1736228TCTGGTTGT-TCTGGTTGT-TCTGGTTGTDesign primers
1736256CCGGTTGTC-CCGGTTGTC-CCGGTTGTCDesign primers
1741410CCGGCATGTTCT-CCGGCATGTTCT-CCGGCATGTTCTDesign primers
1746999GTCAGCAGCGTCGGCAGC-GTCAGCAGCGTCGGCAGC-GTCAGCAGCGTCGGCAGCDesign primers
1864440GCCGGT-GCCGGT-GCCGGT-GCCGGT-GCCGGT-GCCGGT-GCCGGT-GCCGGTDesign primers
1914737CCTCGGTGT-CCTCGGTGT-CCTCGGTGT-CCTCGGTGT-CCTCGGTGTDesign primers
1914838TCGGCGTCA-TCGGCGTCA-TCGGCGTCADesign primers
1932204CACTCAGCG-CACTCAGCG-CACTCAGCG-CACTCAGCGDesign primers
1968705CTGCGTCCG-CTGCGTCCG-CTGCGTCCG-CTGCGTCCGDesign primers
1972172GCATCCCCG-GCATCCCCG-GCATCCCCGDesign primers
2020881TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACA-TCGTCCACADesign primers
2073890GGACAGGCA-GGACAGGCA-GGACAGGCADesign primers
2218754CCCAGCACGG-CCCAGCACGG-CCCAGCACGGDesign primers
2233276TCCACCGGCG-TCCACCGGCG-TCCACCGGCGDesign primers
2288231GGCGTT-GGCGTT-GGCGTT-GGCGTTDesign primers
2289119GTCCATGCGGC-GTCCATGCGGC-GTCCATGCGGC-GTCCATGCGGCDesign primers
2290839TACTGCGACC-TACTGCGACC-TACTGCGACCDesign primers
2323279GCGACCTCA-GCGACCTCA-GCGACCTCADesign primers
2356056CGTCAGCGGC-CGTCAGCGGC-CGTCAGCGGC-CGTCAGCGGCDesign primers
2388396CCCAGCGTTCACGG-CCCAGCGTTCACGG-CCCAGCGTTCACGGDesign primers
2425668GGGACACCG-GGGACACCG-GGGACACCG-GGGACACCG-GGGACACCG-GGGACACCGDesign primers
2433779CAATTGCTGCAGG-CAATTGCTGCAGG-CAATTGCTGCAGGDesign primers
2437198CAGCAAGGT-CAGCAAGGT-CAGCAAGGT-CAGCAAGGT-CAGCAAGGT-CAGCAAGGT-CAGCAAGGTDesign primers
2437454CGTGAAACCAGGCA-CGTGAAACCAGGCA-CGTGAAACCAGGCA-CGTGAAACCAGGCADesign primers
2498844ACCGCCGCCGGCAGGTCATGGTC-ACCGCCGCCGGCAGGTCATGGTC-ACCGCCGCCGGCAGGTCATGGTC-ACCGCCGCCGGCAGGTCATGGTC-ACCGCCGCCGGCAGGTCATGGTCDesign primers
2548116CCTCCCGGG-CCTCCCGGG-CCTCCCGGGDesign primers
2596091GTGGCATTGTCT-GTGGCATTGTCT-GTGGCATTGTCTDesign primers
2598505GTCGTCTGT-GTCGTCTGT-GTCGTCTGTDesign primers
2625530CAGCCAGGC-CAGCCAGGC-CAGCCAGGC-CAGCCAGGCDesign primers
2649915GCCGGGAT-GCCGGGAT-GCCGGGATDesign primers
2650003GCGTCAGCA-GCGTCAGCA-GCGTCAGCADesign primers
2657128TCGACGGGC-TCGACGGGC-TCGACGGGC-TCGACGGGCDesign primers
2671318AAGGATCAG-AAGGATCAG-AAGGATCAGDesign primers
2713177GAAACACCACGCA-GAAACACCACGCA-GAAACACCACGCADesign primers
2728085GGCCACCA-GGCCACCA-GGCCACCADesign primers
2737807GCGTCCAACACC-GCGTCCAACACC-GCGTCCAACACCDesign primers

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