Microsatellites /Tandem Repeats database

Genome: Corynebacterium terpenotabidum Y-11

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
97688AGGCACCTGGCCAGGCACCTGACCGGGCACCTGGCCDesign primers
166570TAGGTCCC-TAGGTCCC-TAGGTCCCDesign primers
195349GAGGCGGGAGGTGGCGGGAGGTGGCGGGAGDesign primers
201894GCTGCGGTGATTGCTGTGGTGATTGCTGGGGTGATTDesign primers
234941CGGCGTCCC-CGGCGTCCC-CGGCGTCCCDesign primers
239038GGGGCGGGGCGGGGCGCGGCGGGGCGCGGCDesign primers
325324GTGAGAGAGGGTGAGAGAAGGTGAGGGAGGDesign primers
331610ATAGCCGTCGTCGTAGCCGTCGTCATAGCCGTCGTCDesign primers
390682CCAGGGCGG-CCAGGGCGG-CCAGGGCGG-CCAGGGCGGDesign primers
391529GGCATGGAGATGCCGGAG-GGTATGGAGATGCCGGAG-GGTATGGAGATGCCGGAG-GGTATGGAGATGCCGGAG-GGTATGGAGATGCCGGAGDesign primers
392016CTCCGGCGGAGGCTCCGGCGGAGACGCCGGCGGAGGDesign primers
407320GCTCGGTCCT-GCTGGGTCCT-GCTGGGTCCT-GCTCGGTCCT-GCTGGGTCCT-GCTGGGTCCT-GCTGGGTCCTDesign primers
513684GTCGGCGTG-GTCGGCGTG-GTCGGCGTG-GTCGGCGTGDesign primers
556369AAGGACAGCACCAAGGACAGCAGCAAGGACAGCACCDesign primers
563044GAGGTGACGGATGCGTGAGGTGACGGATGCGAGAGGTGACGGATGCCTDesign primers
614389GCCCGTCGACCCC-GCCCGTCGACCCC-GCCCGTTGACCCCDesign primers
637819TGCTGGGATTGCTGCTGGGGTTGCTGCTGGGGTTGCDesign primers
641914CCGTGAACGTGCTCAGTGAACGTGCTCAGTGAACGTGCTDesign primers
643041GGAGGACGCCGCAGG-GGAGGACGCCGCAGG-GGAGGACGCCGCGGGDesign primers
644721TCAGCGGTTCGG-GCAGCGGTTCGG-GCAGCGGTTCGGDesign primers
682100CACCGCGTCCGACACCGCGTCTGACACCGCGTCCGADesign primers
687698TGGACGCTG-TGGACGCTG-TGGACGCTGDesign primers
707171ACAACGCTGCCTACAACGCTGTCTACAACGCTGTCTDesign primers
726534GCCTTCCGTCG-GCCTTCCGTCG-GCCTTCAGTCGDesign primers
737275TGCTCCTTGATGCTGCTTGATGCTGCTTGADesign primers
759692TGGAGCATGCCC-TGGAGCATGCCC-TGGAGCAAGCCC-GGGAGCATGCCCDesign primers
767285TCGGCACC-TCGGCACC-TCGGCACCDesign primers
775505AGGATCACAAT-CGGATCACAAT-CGGATCACAATDesign primers
776860ATCCGGCACC-AACCGGCACC-AACCGGCACC-AACCGGCACCDesign primers
780209CTGCGGCTCCGGCTGCCCCGGCCGCTGCGGCTCCGGCTGCTCCTGCCGCTGCGGCTCCGGCTGCTCCTGCCGDesign primers
798188CGGGGCCTATCCGGGCCTATCCGGGCCTATDesign primers
798301TACGCGCCGACAGATACGCGCCGGCAGATACGCGCCGACAGATACGCGCCGACAGADesign primers
799515GTACCTCC-GTACCTCC-GTACCTCC-GTACCTCCDesign primers
803314GGGGCAGGT-GGGGCAGGC-GGGGCAGGC-GGGGCAGGC-GGGGCAGGC-GGGGCAGGCDesign primers
833521TCACTGGGGCAGC-TCACTGGGGCAGC-TCACTGGGTCAGCDesign primers
833561TGCCGGGTCAGCT-TGCCGGGTCAGCT-TGCCGGGTCAGTTDesign primers
838973TCAGGCCCCGGATCAGGCCCTGGATCAGGCTCCGGADesign primers
851319GGGGACCGG-GGGGACCGG-GGGGACCGGDesign primers
855094TCGCGTCTGGTCGCGTGTGGTCGCGTGTGGDesign primers
874584GCCGGA-GCCGGA-GCCGGA-GCCGGADesign primers
1016505CGGTCGCTGACGGTGGCTGACGGTCGCTGGDesign primers
1105946CCACCCCTGAT-TCACCCCTGAT-TCACCCCTGATDesign primers
1113847GGAGGAGACCCCGGTGGAGGAGACCCCAGTGGAGGAGGCCCCGGTGGAGGAGACCCCAGTGGAGGAGACTCCGGTDesign primers
1120456CACCGACTGGCCGCGACCGGCACCGACTGGCAGCGACTGGCAGCGACTGGCAGCGACCGGDesign primers
1177891TCCCTGGTCATCCCTGGTGATCCCTGGTCADesign primers
1179601GGCGGGCCGACGTAGCCGGGTGGTGGACCGACGTAGCCGGGTGGCGGGCCGACGTAGCCGGGTGGCGGGCCGACGTATCCGGGTGGCGGGCCGGTGTAGCCGGGTGGCGGGCCGGTGTAGCCGGGTDesign primers
1261832ACAGGGGAGGGACGGGGGAGGGACGGGGGAGGGDesign primers
1261877GGGGGAGGGA-CGGGGAGGGA-CGGGGAGGGADesign primers
1291945GGGCCACTTCCGCGCGCGGCGCT-GTGTCACTTCCGCGCGCGGCGCT-GTGTCACTTCCGCGCGCGGCGCT-GTGTCACTTCCGCGCGCGGCGCT-GTGTCACTTCCGCGCGCGGCGCTDesign primers
1292993GGAATCTCCACCGGGATCTCCACCGGAATCTCCACCDesign primers
1316875CCGTCGGCA-CCGTCGGCA-CCGTCGGCADesign primers
1371987AGCACTGTGGGGATGAGCACCGTGGGGATGAGCACCGTGGGGATGDesign primers
1374966CGGTATCAG-CGGTATCAG-CGGTATCAGDesign primers
1413398TTTCCCTGC-TTTCCCTGC-TTTCCCTGCDesign primers
1449740CTGAATTCTGCTGAGTTCTGCTGAGTTCTGDesign primers
1457627GGCCCTGGTCCGGGCACTGGTCCGGGCACTGGTCCGDesign primers
1459156TCCTGCTGGTGTCCTGTTGGTGCCCTGCTGGTGDesign primers
1460344CAGGCAGGCTCAAGCAGGCTCAAGCAGGCTDesign primers
1475370GACCTCCAC-GACCTCCAC-GACCTCCACDesign primers
1475398ACCGCCACG-ACCGCCACG-ACCGCCACGDesign primers
1502740CGGAGTAGCTGCCGAGTAGCTGCGGAGTAGCTGDesign primers
1542098CGCAGCCTCCCGCAC-AGCAGCCTCCCGCAC-AGCAGCCTCCCGCACDesign primers
1546320GGTGCGGGT-GGTGCGGGT-GGTGCGGGTDesign primers
1585446ATAACCCTGGCT-GTAACCCTGGCT-GTAACCCTGGCTDesign primers
1599693CGGGACCACGGCGGGACCACGACGGAACCACGGDesign primers
1612153CCGTCGCGCCCACCGTCACGCCCACTGTCGCGCCCADesign primers
1649910CCTCGGCGA-CCTCGGCGA-CCTCGGCGADesign primers
1654365GTCAGTGCCGC-GCCAGTGCCGC-GCCAGTGCCGC-GCCAGTGCCGCDesign primers
1654410CTAGTGCCGCGCCAGTGCCGCGCCAGTGCCGCGDesign primers
1678611CCCGGCCCA-CCCGGCCCA-CCCGGCCCADesign primers
1730402CCGGCACAGTCGCCGGCGCAGTCGCCGGCACAGTCTCCGGCACAGTCADesign primers
1736228TCTGGTTGT-TCTGGTTGT-TCTGGTTGTDesign primers
1736256CCGGTTGTC-CCGGTTGTC-CCGGTTGTCDesign primers
1741409CCCGGCATGTTC-TCCGGCATGTTC-TCCGGCATGTTCDesign primers
1746997GTGTCAGCAGCGTCGGCAGCGTCAGCAGCGTCGGCAGCGTCAGCAGCGTCGGCADesign primers
1779832TCAGGCAGGGAAGGTCAGGCGGGGAAGGTCAGGCGGGGAAGGDesign primers
1793888CCACTGCCGGTCCACTGCCAGTCCACTGCCAGTDesign primers
1845073GGTCACCGCCCCGGTCACCGTCCCGGTCACCACCCCDesign primers
1864439CGCCGG-TGCCGG-TGCCGG-TGCCGG-TGCCGG-TGCCGG-TGCCGG-TGCCGGDesign primers
1914737CCTCGGTGT-CCTCGGTGT-CCTCGGTGT-CCTCGGTGT-CCTCGGTGTDesign primers
1914838TCGGCGTCA-TCGGCGTCA-TCGGCGTCADesign primers
1915376ACTGAGGTGAACTGACGTGAACTCAGGTGADesign primers
1932204CACTCAGCG-CACTCAGCG-CACTCAGCG-CACTCAGCGDesign primers
1968618CCGACTCCTCGCCCGACTCTTCGCCCGACTCCTCCCDesign primers
1968705CTGCGTCCG-CTGCGTCCG-CTGCGTCCG-CTGCGTCCGDesign primers
1972172GCATCCCCG-GCATCCCCG-GCATCCCCGDesign primers
2020879CCTCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCADesign primers
2032925AGAGTGGTCGAGGGTGGTCGAGGGTGGTCGDesign primers
2073890GGACAGGCA-GGACAGGCA-GGACAGGCADesign primers
2166517CAACGCGTACACCGGAATACGGTGTAACGCATACACCGGAATACGGTGTAACGCATACACCGGAATACGGTGDesign primers
2216193TGTCAGTCCCGGGTTGTCAGTCCCGCGTTGTCAGTCCCGCGTDesign primers
2218753TCCCAGCACG-GCCCAGCACG-GCCCAGCACGDesign primers
2233274CATCCACCGGCGTCCACCGGCGTCCACCGGDesign primers
2275883TTCCCGGAGATTCCCAGAGATTCCCAGAGATTCCCGGAGCDesign primers
2288231GGCGTT-GGCGTT-GGCGTT-GGCGTTDesign primers
2289118GGTCCATGCGG-CGTCCATGCGG-CGTCCATGCGG-CGTCCATGCGGDesign primers
2289163GTCCATGCAGCGTCCATGCGGCGTCCATGCGGCDesign primers
2290767CCTGCACCAACCTGCACCGACCTGCACCGADesign primers
2290801CACCGACCTACACCGACCTGCACCAACCTADesign primers
2290832TGCGACATACTGCGACCTACTGCGACCTACDesign primers
2323279GCGACCTCA-GCGACCTCA-GCGACCTCADesign primers
2356055GCGTCAGCGG-CCGTCAGCGG-CCGTCAGCGG-CCGTCAGCGGDesign primers
2388390TCACGACCCAGCGTTCACGGCCCAGCGTTCACGGCCCAGCGTDesign primers
2425657CGGGGACAC-CCGGGACAC-CGGGGACAC-CGGGGACAC-CGGGGACAC-CGGGGACACDesign primers
2433778CCAATTGCTGCAG-GCAATTGCTGCAG-GCAATTGCTGCAGDesign primers
2437195GGGCAGCAA-GGTCAGCAA-GGTCAGCAA-GGTCAGCAA-GGTCAGCAA-GGTCAGCAADesign primers
2437452CTCGTGAAACCAGG-CACGTGAAACCAGG-CACGTGAAACCAGG-CACGTGAAACCAGGDesign primers
2491104CCGGTTCCACCTCAGCCCGTTCCACCTCAGCCCGTTCCACCTCAGDesign primers
2491212GTTCAACCTCAGCCGGCTCAACCTCAGCCGGTTCAACCTCAGCCGDesign primers
2494485TCCACTGTCTGT-TCCACTGTCTGT-TCCACTGTCCGTDesign primers
2498842CTACCGCCGCCGGCAGGTCATGG-TCACCGCCGCCGGCAGGTCATGG-TCACCGCCGCCGGCAGGTCATGG-TCACCGCCGCCGGCAGGTCATGG-TCACCGCCGCCGGCAGGTCATGGDesign primers
2527405GTGGCCGTGCCCGTGGCCGTGCTCGTGGCCCTGCCCDesign primers
2548116CCTCCCGGG-CCTCCCGGG-CCTCCCGGGDesign primers
2553607GTCGGACGGCGTCGGACGTCGTCGAACGGCDesign primers
2596085TTGTCCGTGGCA-TTGTCTGTGGCA-TTGTCTGTGGCA-TTGTCTGTGGCADesign primers
2598505GTCGTCTGT-GTCGTCTGT-GTCGTCTGTDesign primers
2603811CGTCAGCAACCCTGCCCGGCCGATGTCAGCAACCCTGCCCGACCGATGTCAGCAACCCTGCCCGGCCGADesign primers
2603958GGACTGTCAGGGGC-GGACTGTCAGGGGC-GGACTGTCTGGGGCDesign primers
2622588GTCACAACTCCCCGTCACAGCTCCCCGTCACAACTCCTCDesign primers
2625530CAGCCAGGC-CAGCCAGGC-CAGCCAGGC-CAGCCAGGCDesign primers
2640378GGACTCGGTGGTGGATTCGGTGGTGGACTCGGTGGCDesign primers
2649915GCCGGGAT-GCCGGGAT-GCCGGGATDesign primers
2650003GCGTCAGCA-GCGTCAGCA-GCGTCAGCADesign primers
2651497GGGACTGTTTCT-GGGACTGTTTCT-GGGACTATTTCTDesign primers
2657128TCGACGGGC-TCGACGGGC-TCGACGGGC-TCGACGGGCDesign primers
2671318AAGGATCAG-AAGGATCAG-AAGGATCAGDesign primers
2671647GGATGCTCCGGGTGG-GGATGCTCCGGGTGG-GGCTGCTCCGGGTGGDesign primers
2713174GCGGAAACACCAC-GCAGAAACACCAC-GCAGAAACACCAC-GCAGAAACACCACDesign primers
2728085GGCCACCA-GGCCACCA-GGCCACCADesign primers
2732974CTGTCCGGATTCCTGCCCGGATTCCTGCCCGGATTCDesign primers
2737806GGCGTCCAACAC-CGCGTCCAACAC-CGCGTCCAACACDesign primers

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