Microsatellites /Tandem Repeats database

Genome: Conexibacter woesei DSM 14684

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
229312CCGCCGGTC-CCGCCGGTC-CCGCCGGTC-CCGCCGGTCDesign primers
360966GGCGCGCGGCGGCGGGTGCCGCGGC-GGCGGGCGGCGGCGGGTGGCGCGGC-GGCGGGCGGCGGCGGGTGGCGCGGC-GGCGGGCGGCGGCGGGTGGCGCGGC-GGCGGGCGGCGGCGGGTGGCGCGGCDesign primers
361785CGTCCGTCGCCGCGCCGTCCGTCGTCGCGCCGTCCGTCGCCGCGCCCTCCGTCGCCGCGCDesign primers
372178CGCCGG-CGCCGG-CGCCGG-CGCCGGDesign primers
386765GGGCGGCGGCTGACG-CGGCGGCGGCTGACG-CGGCGGCGGCTGACGDesign primers
400132CGCCGCT-GGGCGCT-GGGCGCT-GGGCGCT-GGGCGCT-GGGCGCT-GGGCGCT-GGGCGCT-GGGCGCTDesign primers
564730ACCGCCGCCGCTCGAACC-GCCGCCGCCGCTCGAACC-GCCGCCGCCGCTCGAACCDesign primers
650355GGTCGACGT-GGTCGACGT-GGTCGACGT-GGTCGACGTDesign primers
910500CCGCCGCGCCGCCGGCCGCGC-CCGCCGCCGCGCCGGCCGCGC-CCGCCGCCGCGCCGGCCGCGC-CCGCCGCCGCGCCGGCCGCGCDesign primers
921985GCCTCGCCCTTTGCTCCGGCCTCGCCCTTCGCTCCGGCATCGCCCTTTGCTCCGDesign primers
965334CGCCCCGCTCAGCCGCTCGCGCCGCTCAGCCGCTCGCGCCGCTCAGCCGCTDesign primers
1151830CGACGCCGCCCGCGCCCACGCCGCCCGCGCCCACGCCGCCCGCGCDesign primers
1307923CGTGCCGCCTGCGTCCGCGCCGCCTGCGTCCGCGCCGCCTGCGTCDesign primers
1333970CGCCCGTCGCGCCGCCGCCCGTCGCACCGCCGCCCGCCGCGCCGCDesign primers
1352168GCAGACGGAGGAGGGCGGCGGTGG-GCAGACCGAGCAGGGCGGCGGTGG-GCAGACCGAGCAGGGCGGCGGTGG-GCAGACCGAGCAGGGCGGCGGTGG-GCAGACCGAGCAGGGCGGCGGTGGDesign primers
1381793GCGCCGCACGCTCCCGCGGCGTCGCACGCTCCCGCGGCGTCGCACGCTCCCGCGDesign primers
1397606CCGGCTCCGGCCGCCGAGGCC-GAGGCTCCGGCCGCCGAGGCC-GAGGCTCCGGCCGCCGAGGCC-GAGGCTCCGGCCGCCGAGGCCDesign primers
1518907CCGCCGGCGCAGAGCAGCCCACCGGCGCAGAGCAGCCCGCCGGCGCAGAGCAGCDesign primers
1802688GGGGCTGCGCAAGCTGCGCTGAG-CGGGCTGCGCAAGCTGCGCTGAG-CCGGCTGCGCAAGCTGCGCTGAGDesign primers
1838869GGCGGTGGC-GGCGGTGGC-GGCGGTGGCDesign primers
1853354GCCGCGCCGCCCGCTGTCGCGCCGCCCGCTGTCGCGCCGCCCGCTDesign primers
1853824CCGTCACGGCCCGTCACGCCCGGTCACGGCDesign primers
1911626CGCGCGCGCCCGCCCGCGCCCTCGCGCGCCDesign primers
1960111GCCGCTCCCGGCGTGGCCGCCCCCGGCGTGGCCGCCCCCGGCGTGDesign primers
1989715CGGCGACGGCGAGCGGCGACGACGGCGAGCGGCGGCGACGGCGAGCGGDesign primers
2020928GCCCGGCTCTCTGCCGCCGGGCTCTCTGCCGCCGGGCTCTCTGCCDesign primers
2305507GCCGCGCCGGCCGCGCCCGTGCAGGCGACGCCGGCCGCGCCCGTGCAGGCGACGCCGGCCGCGCCCGTGCAGDesign primers
2403357CCTCGCCCG-CCTCGCCCG-CCTCGCCCG-CCTCGCCCGDesign primers
2470305CGCGGCTGGCGCGAGCGG-CGCGGCTGGCGCGAGCGG-GGCGGCTGGCGCGAGCGG-GGCGGCTGGCGCGAGCGG-GGCGGCTGGCGCGAGCGGDesign primers
2493422GACGACCGCGGCGACCAA-GACGACCGCGGCGACCAA-GACGGCCGCGGCGACCAADesign primers
2496262CGGGGCGCGTCCGGGCGCGTCCGGGCGCGTDesign primers
2532728GGGCGACCCGACCGGCGCGGGCGTGGGCGACCCCACCGGCGCGGGTGTGGGCGACCCGACCGGCGCCGGCGCGGGCGACCCGACTGGCGCGGGCGCGGGCGACCCGACTGGCGCGGGCGCGGGCGACCCCACCGGCGCGGGCGGDesign primers
2550851CCGCCGCCGGCCCGC-CTGCCGCCGGCCCGC-CTGCCGCCGGCCCGC-CTGCCGCCGGCCCGCDesign primers
2550923CGCCCGCCGCCGGCC-CGCCTGCCGCCGGCC-CGCCTGCCGCCGGCC-CGCCTGCCGCCGGCC-CGCCTGCCGCCGGCCDesign primers
2575087GCGGCCGCGCACGGCCGCGCGCCGCCGCGCDesign primers
2597486CGGCGGGCG-CGGCGGGCG-CGGCGGGCGDesign primers
2625807CGGCGCGCGCGGCGG-CGGTGCGCGCGGCGG-CGGTGCGCGCGGCGG-CGGTGCGCGCGGCGG-CGGTGCGCGCGGCGG-CGGTGCGCGCGGCGG-CGGTGCGCGCGGCGGDesign primers
2627478GCCGCGCGCGGCGGCGCGCGGACGCGCGCGDesign primers
2654434ACCGCGTCGCTCGCGCCG-GCCGCGTCGCTCGCGCCG-GCCGCGTCGCTCGCGCCGDesign primers
2712586CCGCCGCCGTGCCGCCCGCCGCCGCGCCGCCCGCCGCCGCGCCGCDesign primers
2715634GCCGCGCCGCCCGCT-GCCGCGCCGCCCGCT-GCGGCGCCGCCCGCT-GCGGCGCCGCCCGCT-GCCGCGCCGCCCGCT-GCCGCGCCGCCCGCTDesign primers
2857029CGGCCGGCGCGGCGG-CGGGCGGCGCGGCGG-CGGGCGGCGCGGCGG-CGGGCGGCGCGGCGGDesign primers
3067895GCCGAGCCGGAGGCTGCCGCTGAGCCGGAGGCTGCCGCTGAGCCGGAGGCTGCCDesign primers
3076587CGCCGGGGGAGCCGCTCC-CGCCGGGGGAGCCGCTCC-CGCCGGGGAAGCCGCTCCDesign primers
3142651GCCGGCTCGGTCAAGTA-GCCGGCTCGGTCAAGTA-GCCGGCGCGGTCAAGTA-GCCGGCGCGGTCAAGTADesign primers
3165642CCGGCTCCGCGTCCGTCC-CCGGCTCCGCGTCCGTCC-CCGGCTCCGCGGCCGTCC-CCGGCTCCGCGTCCGTCC-CCGGCTCCGCGGCCGTCC-CCGGCTCCGCGTCCGTCCDesign primers
3248926CGGTCT-CGGTCT-CGGTCT-CGGTCTDesign primers
3338428GGCGTGCCGGTCCCGCCGGGCGTGCCAGTCCCGCCGGGCGTGCCAGTCCCGCCGGGCGAGCCGGTCCCGCCGDesign primers
3523530CGGGCGCGGCGCGGG-CGGGAGCGGCGCGGG-CGGGAGCGGCGCGGG-CGGGAGCGGCGCGGGDesign primers
3547712CG-GC-CG-CG-GG-CG-CG-CC-GG-CC-GC-GG-GC-CC-GC-CG-GC-CG-CG-GG-CG-CG-CDesign primers
3565672CACCGCCCGCCGCCGCACCGCCCGCCGCCACGCCGCCCGCCGCCGDesign primers
3569064CCGCTGCCGCGCCGC-CCGCTGCCGCGCCGC-CCGCCGCCGCGCCGCDesign primers
3574196TCTCGGCTCGGGCGTTCTGGGCTCGGGCGTTCTCGGCTCGGGCGTTCTCGGCTCGGGCGGDesign primers
3586913CGCGGCCCGTCTCGG-AGCGGCCCGTCTCGG-AGCGGCCCGTCTCGGDesign primers
3675927CCCGGCCGCACCGTCTCT-GCCGGCCGCACCGTCTCT-GCCGGCCGCACCGTCTCTDesign primers
3795640GGCGGCGTGGTGGCGCCAGGCGACGTGGTGGCGCCAGGCGGCGTGGTGGCGCCAGGCGACGTGGTGGCGCCAGGCGGCGTGGTGGCGCCADesign primers
3797005CACGGCATCGCCTCG-CCCGGCATCGCCTCG-CCCGGCATCGCCTCG-CCCGGCATCGCCTCGDesign primers
3855729CTCAGCTCTCGCAGGTGCCTCAGCTCTCGCAGGCGCCTCAGCTCTCGCAGGCGCDesign primers
4001661CTCCGG-CTCCGG-CTCCGG-CTCCGGDesign primers
4012287GTCGTGCCGGCGGTGTCG-GTCGTGCCGGCGGTGTCG-GTCGTGCCGGCGGTGCCG-GTCGTGCCGGCGGTGCCGDesign primers
4160576CCGGCGCAGCCGGCGCGA-GCGGCGCAGCCGGCGCGA-GCGGCGCAGCCGGCGCGADesign primers
4184809CGGAGCGGC-CGGAGCGGC-CGGAGCGGC-CGGAGCGGCDesign primers
4516439GGGCGGGCGGGGCGGAGCGGCGGTGCGAGCGGGGCGGAGCGGCGGTGCGAGCGGGGCGGAGCGGCGDesign primers
4524598CGGGGCCGCGGCGGGCGGCGGGGCGGCGGCGGGCGGCGGGGCGGCGGCGGGCGGDesign primers
4524653GGCGCGGCGGCGGGCGGC-GGCGCGGCGGCGGGCGGC-GGGGCGGCGGCGGGCGGC-GGGGCGGCGGCGGGCGGC-GGCGCGGCGGCGGGCGGCDesign primers
4527006GGGGTTCTCGGCTCCTCCGGCGTTCTCGGCTCCTCCGGCGTTCTCGGCTCCTCCDesign primers
4547582GCCGCGGGCGGCGGCGCGGCGGGCGGCGGCGCGGCGGGCGGCGGCDesign primers
4547628CGGCGGGCAGCGGCGCGGCGGGCGGCGGCGCGGCGGGCAGCGGCGCGGCGGGCAGCGGCGDesign primers
4586108CCGCGCCGCCCGCCCCAG-CCGCGCCGCTCGCCCCAG-CCGCGCCGCTCGCCCCAG-CCGCGCCGCCCGCCCCAG-CCGCGCCGCCCGCCCCAGDesign primers
4608549CGGACGAGCGCGAGC-CGGACGAGCGCGAGC-CGGACCAGCGCGAGC-CGGACCAGCGCGAGCDesign primers
4831778CACCCG-CACCCG-CACCCG-CACCCGDesign primers
4870484CGGGATCGACCGGACCGGGATCGACGGGACCCGGATCGACCGGACCGGGATCGACGGGACDesign primers
4870594TTGACCGGGCCGGGA-TCGACCGGGCCGGGA-TCGACCGGGCCGGGA-TCGACCGGGCCGGGADesign primers
4872372CAGCCGCCGCGCGCATCG-CAGCCGCCGCTCGCATCG-CAGCCGCCGCTCGCATCG-CAGCCGCCGCTCGCATCGDesign primers
4993252CGGCGGCGGCGCGGC-GGGCGGCGGCGCGGC-GGGCGGCGGCGCGGC-GGGCGGCGGCGCGGC-GGGCGGCGGCGCGGC-GGGCGGCGGCGCGGCDesign primers
5012843CCCGCCGGCGCCCCCGCT-CCCGTCGGCGCCCCCGCT-CCCGTCGGCGCCCCCGCT-CCCGTCGGCGCCCCCGCTDesign primers
5084628TCTGCCGCC-TCTGCCGCC-TCTGCCGCCDesign primers
5270634CGGGAGCGG-CGGGAGCGG-CGGGAGCGGDesign primers
5311318CCGCAGCGCCGTGCGAGTCCGCGGCGCCGTGCGAGTCCGCGGCGCCGTGCGAGTDesign primers
5356674GTGGCGGCGCAGGCGGCGGCGCAGGCGGCGGCGCAGDesign primers
5363654TGCGGGCGGCGCGGG-CGCGGGCGGCGCGGG-CGCGGGCGGCGCGGG-CGCGGGCGGCGCGGG-CGCGGGCGGCGCGGGDesign primers
5363730GCGGGCGGCGCTGGC-GCGGGCGGCGCTGGC-GCGGGCGGCGCTGGC-GCGGGCGGCGCTGGCDesign primers
5387171GACGCGGGCAGCGCG-GTCGCGGGCAGCGCG-GTCGCGGGCAGCGCG-GTCGCGGGCAGCGCG-GTCGCGGGCAGCGCG-GTCGCGGGCAGCGCGDesign primers
5390163TGTCTGCCTTGGTCGCCTTGTCTGCCTTGGTCGCCCTGTCTGCCCTGGTCGCCTDesign primers
5390283TCACCTTGTCTGCCTTGG-TCGCCTTGTCTGCCTTGG-TCGCCTTGTCTGCCTTGG-TCGCCTTGTCTGCCTTGGDesign primers
5390356CGCCTTGTCTGCCCTGGT-CGCCTTGTCTGCCCTGGT-CGCCTTGTCTGCCCTGGT-CGCCCTGTCTGCCCTGGT-CGCCCTGTCTGCCCTGGT-CGCCCTGTCTGCCCTGGT-CGCCCTGTCTGCCCTGGT-CGCCCTGTCTGCCCTGGT-CGCCCTGTCTGCCCTGGTDesign primers
5409329GGGCGCGGCGCCGCGCGCGGCGCCCGGCGCGGCGCCDesign primers
5409799CGCCGGTCT-CGCCGGTCT-CGCCGGTCT-CGCCGGTCTDesign primers
5508776GCCGTCCTTGCCGCCGCCGTCCTTGCCGGCGCTGTCCTTGCCGCCDesign primers
5547717CAGCTCGCCGCCCGGTCGGGAC-CATCGCGCCGCCCGGTCGGGAC-CATCGCGCCGCCCGGTCGGGAC-CATCGCGCCGCCCGGTCGGGAC-CATCGCGCCGCCCGGTCGGGAC-CATCGCGCCGCCCGGTCGGGACDesign primers
5597782CGCTGACCGAGCCGCGCGCTCACCGAGCCGCGCGCTCACCGAGCCGCGDesign primers
5676971GTGGGCGTCGTCGGGGTG-GTGGGCGTCGTCGGGGTG-GTGGGCGTCGTCGGCGTGDesign primers
5677026TGGGCGTGG-TGGGCGTGG-TGGGCGTGGDesign primers
5762991CCGGC-CCGCC-CCGCC-CCGCC-CCGCC-CCGCCDesign primers
6019324CGGCGATCG-CGGCGATCG-CGGCGATCGDesign primers
6035359CGCCGG-CGCCGG-CGCCGG-CGCCGGDesign primers
6036531CGGCGTCCG-CGGCGTCCG-CGGCGTCCGDesign primers
6085763CGCCTC-CGCCTC-CGCCTC-CGCCTCDesign primers

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