Microsatellites /Tandem Repeats database

Genome: Deinococcus deserti VCD115

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
43693CTGCTGCTGCCGCTGCTGCTGGTGDesign primers
110775GGCAACGGCATCGGCAAGGGCAAGDesign primers
197493GGGCTACAACGCCTGGAGCAGCGGGTATAACGCCTGGAGCAGTGGGTACAACGCCTGGTCCAGCGGCTACAACGCCTGGAGCAGDesign primers
198659CCGGTTCCTTCGGTGCCTGGGCCACCGGTTCGTTCGGTGCGTGGGCCAGTGGATCGTTCGGTGCCTGGGCCADesign primers
201417CCTGCCGGCGCTGACCCTGGCGGCCCTGAGCCTTCCGGCGGTGGCDesign primers
214372CCAGCGCCAGGGCCAGCACCACCGDesign primers
383050GGTGGCGATGGCGTTGGCGGTGTCDesign primers
421924CGGCACCGGCGCTGGCACCGTCACDesign primers
448828CCCATGCCGATGCCCATGCCCACGDesign primers
505522TGGTGGTAGTGGTGGTGCTGGTGGDesign primers
508998CTCCAGCAA-CTCCAGCAA-CTCCGGCAADesign primers
552734TTGGCCTGGGCCTTGGGCTTGACCDesign primers
570798CCCCACCCCCCCAGCCCCCTACCCDesign primers
667199CGGATCCTGATCCGGAGCTGGATCDesign primers
730139GCTCCAGCAGCCCAGACTCCGGCAGCCCAGACTCCGGCAGCCCGGDesign primers
880964GCCGGCAGGACCAGCGGGGCCGGCAGGACCGGCGGGGCCAGCAGGACCGGCAGGGCCAGCAGGACCGGCAGGDesign primers
1016313CCCAGCGCCAGCCCCAGCACCAGCDesign primers
1039092GGGTATAGCGGTGGAGGCTACAGCGGTGGCGGCTACAGCGGGGGADesign primers
1397845TTCTGTCTTGTCTGTCTTATCTGTCTTDesign primers
1442978GCAACCCCCTGCTCCGCAACCACCGGCGCCTCAGCCGCCTGCTCCDesign primers
1572356ACTGGA-ACTGGA-TCTGGA-ACTGGCDesign primers
1653204AGCGCGGGCAGCGCGGGAAGCGCTGGCDesign primers
1832348CAA-CCA-CCA-CCA-CGA-CCA-CGA-CCADesign primers
1832942CGACCACCACCACGACGACGACGADesign primers
1832978CCACCACGACCACCATCACCATCACCACCADesign primers
1860498TTCGGTCGTTTCGGTGGTTTCAGTCGTDesign primers
1860643CCGGTTGTATCAGTACCTGTAGTGTCAGTACCGGTCGTTTCCGTADesign primers
1949516GCCATGGTC-TCCATGGTC-TCCATGGTCDesign primers
2301538CACCAGCAGCAGCAGCAGCGCCAGDesign primers
2353876CACCGAAACCACGGAAACGACTGAAACCACGGAGACCACCGAGACCACCGAAGCDesign primers
2657511GTAGGTGCTGGAGCTGGAGTGGGCGCAGGAGCTGGAGTAGGTGCTGGCGCGGGCDesign primers
2657583GCTGGAGCCGGAGCTGGGGCTGGTDesign primers
2657616GGAGCAGGAGCCGGTGCAGGAGCCGGAGCTDesign primers
2802022TCCTGTGGAGCCGGCTCCTGTTGATCCAGCTCCCGTCGAGCCGGCDesign primers
2813734GCTTCCTCAACGGCTGCTTCCTCAATGCCTGCTTCTGCACCGGCTDesign primers

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