Microsatellites /Tandem Repeats database

Genome: Helicobacter pylori F30

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
64171TTGTCTTTTTCTTTGACTATGTCTDesign primers
64260TTCTTCTTTAGGCTCTTCTTTTTTAACCTCTTCAACTTTAGGCTCDesign primers
64402TCTTTTTTGGGTTTTTCTTTTTTTGGCTCTTCTTTCTTGGGTTTTDesign primers
77054TTTAGTTTC-TTTAGTTTC-TTTGGTTTCDesign primers
81969ATTTAAAT-ACATAAAT-ACATAAAT-ATATAAAT-ATATAAAT-ATATAAATDesign primers
83194TAAAAATCTCTAAAAATCCCTAAAAATAGCDesign primers
115619AAAATTAAAATCAAAGTTAAAATCDesign primers
136032GCAAAAACAAGAGAATAAACAAGAGCAAGAAAAAGADesign primers
141525CCTTTAATCT-TATTTAATTT-TATTTAATTT-TATTTAATCT-TATTTAATCT-TATTTAATCT-TATTTAATCT-TATTTAATCT-TATTTAATCT-TATTTAATTT-TATTTAATCT-TATTTAATCT-TATTTAATCT-TATTTAATCTDesign primers
144220CTTTTCTTTTTTAAACTCTCTTTTTTTAAACTCTCTTTTTTTAAADesign primers
144266TCTCTTTTTTTGAAC-TCTCTTTTTTTGAAC-TCTCTTTTTTTGAAC-TCTTTCTTTTTGAAC-TCTTTCTTTTTGAACDesign primers
174196CCAAATAAATGCTGAATAAATGCCAAATAGATGDesign primers
202631AAAAGTAGAACAAGAACAACAAAAGACAGAACAAGAACAACAAAAGACAGAACAAGAAAAACADesign primers
210768ATTTAATCTTCATTTAATATCCGTTTAATCTTTDesign primers
252615GTTAATG-TTTAATG-TTTAATG-TTTAATGDesign primers
267468GATGAAAAAAAAGATGAAAAAGTAGTTGAAAAAAATDesign primers
267612CAAAAAGATGAGCAAAAAAATGAGCAAGAAGAAGAGDesign primers
369116AAAAAAGAAAAATAAGAAAAAATAADesign primers
372713TTGA-TTGA-ATGA-TTGA-ATGA-TTGADesign primers
372874CTTAATTCATTTAAAGCTTTATTGATTTAAGGCTTTATTGATTTAAGGDesign primers
395693TT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CT-CTDesign primers
464555GAATTTTTGATCAAGCGGTTTTTGATCAAGGGGCTTTTGATCAAGDesign primers
467033GCGTTTGCGTTGGCGCTTGCGTTGDesign primers
476108ACTCTTTTTAAACCTTTCTTTTTTTTTAAACCTTTCTTTTTTTTTAAACCTTTCDesign primers
522847TTCACAGAATTA-AACACAGAATTA-AACACAGAATTA-AACACAGAATTADesign primers
523329TAGTTTTTGTTTTGGTTTTAGATTDesign primers
526620TTAAGAAAAATGAGGTCAAAAAAGATGAGGTTAAAAAAGATGAGADesign primers
560095CAAATTTTAAG-ATAATTTTAAG-ATAATTTTAAGDesign primers
698514ATGCCCTCTTATACTCTCTTATACCCTTTTDesign primers
710988CTTCTTTATTTTTCA-GTTCTTTATTCTTTA-ATTCTTTATTCTTTA-ATTCTTTATTCTTTADesign primers
721480GAGATCATGATGATTTGAGAG-TTAATTATGATGATTTGAGAG-TTAATTATGATGATTTGAGAG-TTAATTATGATGATTTGAGAG-TTAATTATGATGATTTGAGAGDesign primers
733970TATTACATGCCCTAT-TATTACATGCCCTAT-GGTTTCATGCCCTATDesign primers
750249AAAGCGCGCAAAAAATCGCACAAAAAATCGCGCAAADesign primers
753027GGATTCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAG-ATCATCGTATTTTCCTGTGAGDesign primers
772184TCAATCATTTTAAAT-CCTTTCATTTTAAAT-CCTTTCATTTTAAAT-CCTTTCATTTTAAATDesign primers
928899TGCACAAACGCCTCCACGAACGCCTCCACAAACGCTDesign primers
972010TTTTCAGTTTCATTTTCTGTTTCADesign primers
992857AGAAGTGGTGTGATAT-AGAGATAGTGTGATAT-AGAGATAGTGTGATAT-AGAGATAGTGTGATAT-AGAGATAGTGTGATAT-AGAGATAGTGTGATATDesign primers
992954GAGATAGTGTAATATA-GAGATAGTGTAATATA-GAGATAATGTGATATADesign primers
1015596TTTATTTTTTCTTTTTTATTGTTTAGTTDesign primers
1051646TCCCATCGGTCCCATCAGTCCCATCGGDesign primers
1060313CACATCGCCCCCATCGCCCCCATCGCCDesign primers
1081423GATATTAGGGATATTGGGGATATTAGGDesign primers
1202256TATTTTTAAGATATTTTCAAGGTATCTTTAATADesign primers
1285865ATATTTTGAATATTTTTAATATTTTGTDesign primers
1296439CCCCATATCCCCCATGTCTCCCATATCDesign primers
1355294CAGCGGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAA-TAAAAGAADesign primers
1359769AATTAAATAAAGCCTTAAATCAATAAAGCCTTAAATCAATAAAGCTTTDesign primers
1359962GCATTCAA-TCATTCAA-TCATTCAADesign primers
1381429GCCGAACAACAAGCAGAGCAACAAGCTCAACAACAAGCTCAACAACAADesign primers
1398999AAAAAC-CCAAAC-CCAAAC-CCAAAC-CCAAAC-CCAAACDesign primers
1532676TTTTTTTTATTTTGTTATTTTTGTTDesign primers
1551170TATCGTTTTATCTTTTTATCATTTDesign primers

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