Microsatellites /Tandem Repeats database

Genome: Rhizobium sp. IRBG74

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
3912AGCCTGAACCTGAGCCTTTGCCTGDesign primers
5759CGGATGCGGTTGCGGAGGTGGATGDesign primers
480959TCCTCTTCCTCGTCTTCTTCCTCGDesign primers
579957AAATGCTGAAAAGCTGAAATCCTGDesign primers
612964CGCCGCCGCCGGTGCCGCCGCGGCDesign primers
613156TGG-CGG-CGG-CGG-GGG-CGG-TGG-CGGDesign primers
825982CGTGATCATGATCGTGTTCGTGCTDesign primers
911514CGTCGA-TGTCGA-GGTCGA-GGTCGADesign primers
1112837CGTCGAGGCGCATCGAGGTGCGTAAAGGCGDesign primers
1287159ATCGTC-ATCGTC-GTCGTC-ATCATCDesign primers
1627564CAGATC-CAGATC-GAGATC-GAGATCDesign primers
1730727GCTGTCTAGTTGTCTAACTGTCTADesign primers
1736163GGC-GGC-GGC-GGT-GGT-GGC-GGT-GGCDesign primers
1818374GAT-GGT-GGT-GGT-GGT-GGT-GGT-GGTDesign primers
2095113TCCACCGCT-TCCACCGCT-TCCGCCGCTDesign primers
2223155CTGGTGCTGATGCTGGCGCTGGCGDesign primers
2243057CCGACGGCATGAAGACAGACGCCATGAAGCCCGACGCGATGAAAADesign primers
2274333GGCGGCGGCCGGAGACGGCCGGCGGCGGGTDesign primers
2331376CAGCACCAGAACCAGCCCCGGCACDesign primers
2714928CATGCATAAACAGGAATAAACGTGCATGAACATGCATATTDesign primers

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