Microsatellites /Tandem Repeats database

Genome: Enterococcus faecalis 62

Search your sequence for microsatellites
This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.
Info
Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2
 
PositionSequence 
222542CGTCATCGTAATCGTCATCATCATDesign primers
228842TCTTACTTTTTTCTTCTTTTTTTCTTACTTTTTDesign primers
303234TTTTTCAATTTTATCAATTTCTTCAATDesign primers
489540CGCCAAAACCAG-ATCCAAAACCAG-ATCCAAAACCAG-ATCCAAAACCAGDesign primers
538386AAAAAAAGAAGAAAAACAAAAAACADesign primers
660428ACGTGGCGG-ACGTGGCGG-ACGTCGCGGDesign primers
817330TATTGCCAACATACTGGCAACAAATTGCCAACGDesign primers
862211TATAAAATATAGAATATAAATTATAAAADesign primers
865217TAATCACAAATCACTTATCACAAATCACDesign primers
870552AAAAAAACAAACAAAAAACAAAAAAAAAAACAAAADesign primers
875716CATATCATTGCATTTCATTTCATTTCCTTGDesign primers
890077GAAAA-GAAAG-TAAAA-TAAAA-GAAAA-GTAAADesign primers
967345GAATAAAGC-TAATAAAGC-TAATAAAGCDesign primers
1004056TTGTTTGCATTATTTTGCATTTGTTTGCAADesign primers
1037941AGAGTCGCTTGTTTTGGTATCGCTTGTTTTAGAATCACTTGATTTDesign primers
1084988GTCAAAAACATTCAAAAAAATTAAAAAACAGTCATAAAAADesign primers
1115155ATAAAAATAATAAAAAAAATAAACAAAAAADesign primers
1115208TT-TT-TT-TG-TT-TA-TT-TT-TT-TG-TC-TT-TDesign primers
1207041TA-AA-AA-TT-AA-AA-TA-TA-AA-TA-TA-AADesign primers
1245736CAAAA-CAAAG-CCAAA-CCAAA-CAAAADesign primers
1345554AATTTTGGCGGTTTTTTGGCGGAAAGTTGGCGGDesign primers
1381616AGTGGTAGAAAGTGGTGGGATGTGGTAGACDesign primers
1552870GATGATGAAGAAGATGAAGATGAAGAADesign primers
1552992TGATGACGATGATGTTGAAGATGADesign primers
1678530GT-GA-AA-AA-AT-GA-AA-AA-GA-GA-AA-AADesign primers
1736722TT-TT-TA-AA-TA-TT-TT-TT-AA-AT-AA-TT-TT-TA-TT-TA-TDesign primers
1905455ACAACAACAACAGCAACAGCAACAACAAGADesign primers
1971439TTTTAAATCTTTTAATTCTTTTAAATTDesign primers
2055484TT-TT-TT-TC-TT-TT-TC-TT-CT-TT-TT-GT-TT-TT-CTDesign primers
2098921AATAATAACAACAACAATAACAATAAAAAGAACAACDesign primers
2185797TAAACAATAAATAAACAGTAAGGAAACAATAGADesign primers
2196623TTAATTTAAGTTCATTTATTTTATTDesign primers
2269827TTTTTTTGTTCTTTTTTTGTTTTTTCTTTTTTTTCDesign primers
2320618GT-TT-CT-TT-TT-TT-CT-TT-GT-TT-GT-TTDesign primers
2356616TTTTT-GTTTA-CTTTA-CTTTT-ATTTA-CTTTA-CTTTC-CTTTA-CTTTADesign primers
2592544AGAAAAAGCAAAAAAAAAAGAAAGDesign primers
2707039ATTGGTATTGGCATTGCTTTTGGTDesign primers
2799832TT-TT-TG-TT-TT-TA-TG-TT-TT-TT-TC-TTDesign primers
2805675ATAAA-ATGAA-ATAAA-ATATA-ATTAADesign primers
2816117TTTTTTATTTATTTTTTTTGTTTTCDesign primers
2840599TT-TT-TT-TT-AT-TT-AT-TT-TT-TT-GT-TT-TDesign primers
2904614TTTATATTTTTATTTTTATTTATTDesign primers
2979830CATGATTTTTCGTCATTTTTTTTGATTTTTDesign primers

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