Microsatellites database

Microsatellites /Tandem Repeats database

Genome: Corynebacterium terpenotabidum Y-11

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | **0.2**
Position	Sequence
30382	CGGTGCCGACGGGGCCGACGGTGCCGA	Design primers
30790	CGTCAGTTGGCGTCTGCTGGCGTCTGCTGG	Design primers
40869	TGGTGTGCGTGGTCTCGGGCGTGCTGTGCAAGGTCTCGGGCGTGCTGTGCAAGGTCTCGTGCG	Design primers
56045	GCGGTATCGAGGCCGGTATCGAGACCGGTATCGGGG	Design primers
56116	TGCTGCAGTGCAGGTGCAGTGCGGCTGCAGTGC	Design primers
62337	GGGGCTGCGGGTGCTGCGGGTGCTGCG	Design primers
62365	GGGCAGCCGGTGCGGCAGGGGCAGCGGGAGCGGCCGGAGCGGCCGGTGCGGCAGGAGCAGCCGGAGCGGCGGGTGCGGCCGGTGCGGCAG	Design primers
79438	TGTGCCGGATGTGTCGGAGGTGCCGGA	Design primers
97686	CGAGGCACCTGGCCAGGCACCTGACCGGGCACCTGG	Design primers
100246	GGCGGCGGCCGCGGCGGCGTCGGC	Design primers
100451	TCGTCACTGCC-GGGTCACTGCC-GGGTCACTGCC	Design primers
107581	TCACCG-GCACCG-GCACCG-TGACCG	Design primers
159404	GCCCCTGAGGTCCCTGAGGTCCCTGAG	Design primers
166569	GTAGGTCC-CTAGGTCC-CTAGGTCC	Design primers
180856	TGG-TGC-TGG-TGA-TGA-TGC-TGG-TGA	Design primers
195348	AGAGGCGGGAGGTGGCGGGAGGTGGCGGGA	Design primers
201892	TCGCTGCGGTGATTGCTGTGGTGATTGCTGGGGTGA	Design primers
229520	CCAGCTCCT-CCAGCTCCT-CCAGCCCCT	Design primers
234940	ACGGCGTCC-CCGGCGTCC-CCGGCGTCC	Design primers
239037	GGGGGCGGGGCGGGGCGCGGCGGGGCGCGG	Design primers
251869	TCGCCGCTGGCGTCGCCGCTGAGGTCGCCGCCGACG	Design primers
277870	CG-GG-AG-CG-GG-CG-CG-GG-TG-CG-GG-GG	Design primers
289569	CATGGG-CGTGGG-CGTGGG-CATGGG	Design primers
325302	GA-GA-GT-GA-GG-GT-GA-GG-GT-GA-GG-GT-GA-GA-GA	Design primers
331609	TATAGCCGTCGTCGTAGCCGTCGTCATAGCCGTCGT	Design primers
332123	CGCCGGGGCGACAGCCGGGGCGGCGGCCGGGGCGTC	Design primers
338654	GAGGAATCA-GAGGAATCA-GCGGAATCA-GAGGAATCG	Design primers
354140	GTCCGCGTCCACGACCGCGTCCAC	Design primers
379596	ACGGCCACGACCAGGGCCACGGCA	Design primers
388094	TTGCCG-TTGCCG-CCGCCG-TTGCCG-TTGCCG-GTCCCG	Design primers
388243	CTGACCGTACTGGCCGTACTGACCGTA	Design primers
390625	TGCCCAGGGCACTGCGGATGCTCAGGGCACTGCTGACGCCGAGGGCACTGCTGA	Design primers
390680	GCCCAGGGC-GGCCAGGGC-GGCCAGGGC-GGCCAGGGC	Design primers
391482	AGATGCCGGAGGGCATGG-AGATGCCTGAAGGGATGG-AAATGCCTGAAGGCATGG-AGATGCCGGAGGGTATGG-AGATGCCGGAGGGTATGG-AGATGCCGGAGGGTATGG-AGATGCCGGAGGGTATGG-AGATGCCGGAGGGTATGG	Design primers
392012	GAGGCTCCGGCG-GAGGCTCCGGCG-GAGACGCCGGCG-GAGGCTCCGGGT	Design primers
395008	CGGTGGTGGCGACGGCGGTGGTGCACACGGCGGTGGCGGCGTCCG	Design primers
404029	CGACGGACACTGAGACAGACACTGCGACGGTCACCG	Design primers
407316	CCCGGCTCGGTCCTGCTGGGTCCTGCTGGGTCCTGCTCGGTCCTGCTGGGTCCTGCTGGGTCCTGCTGGGTCCTGCTGGT	Design primers
424658	TGACCGCCACCCTGACCGCCACTCCGTCCGCCACCC	Design primers
432980	CCGGGTTCAGTCCCGGGTTCAGTTCCTGGATCAGTC	Design primers
440993	CGGAGGCACCAGAGGCACCGGGGGCACCGGGGGCAC	Design primers
444856	TGGGACATGCGGGGGCATGCGGGGGCATGC	Design primers
448470	CCCCCGGCCCCGCCCCCGCCCCCT	Design primers
475320	AGACTGCAGCCCAGACGGCGGCCCAGACAGCGGCCC	Design primers
477246	GGAACCTGCGGAACCAGCGGAACCTGA	Design primers
482328	TGCCGGTCTCTGCCGACCTCTGCCGGTCTC	Design primers
502328	CTGACCGGATAGCGCTGACCAGACAGCGCTGACCGGACAGCG	Design primers
513683	CGTCGGCGT-GGTCGGCGT-GGTCGGCGT-GGTCGGCGT	Design primers
556365	CACGAAGGACAGCACCAAGGACAGCAGCAAGGACAG	Design primers
563039	TGGCTGAGGTGACGGATGCGTGAGGTGACGGATGCGAGAGGTGACGGA	Design primers
589461	GTTCAGCTACCTGCTCAGCTACCTGCTGAGCTACCT	Design primers
593235	CGGTGT-CGGAGT-CGGAGT-CGGTGT	Design primers
600728	CCTGCAACAGAGAACCTGCAACAGCGAACCTGCAACAAGGAA	Design primers
612704	CTGGTCCAGGTCCCGGTCCAGGTC	Design primers
614388	GGCCCGTCGACCC-CGCCCGTCGACCC-CGCCCGTTGACCC	Design primers
634022	TGTGGGGGGTTGTGGGGGCGTGTGTGGGTT	Design primers
637801	GCTTGTTGCTGG-GCTTGTTGCTGG-GATTGCTGCTGG-GGTTGCTGCTGG	Design primers
641912	CACCGTGAACGTGCTCAGTGAACGTGCTCAGTGAACGTG	Design primers
643038	CACGGAGGACGCCGC-AGGGGAGGACGCCGC-AGGGGAGGACGCCGC	Design primers
644720	CTCAGCGGTTCG-GGCAGCGGTTCG-GGCAGCGGTTCG	Design primers
655930	GGTGCCGCTGGAGCCGCTGGTGTCGCT	Design primers
659943	GCAGTACTA-GCAGTACTA-GCAGTACAA-GCAGTACAA	Design primers
660181	ACCCCGGAA-GCCCCGGAA-GCCCCGGAA	Design primers
679546	CTGCGGATGTGGCGGTGGATGTGGTGGCGGATGTGGCGGTGGATGTGG	Design primers
682085	CGGCACCGGGTCTGGCACCGCGTCCGACACCGCGTC	Design primers
687697	CTGGACGCT-GTGGACGCT-GTGGACGCT	Design primers
695316	TTCTGCCGACGTGCTGATCCCCCTTTCCCGCCGACGTGCTGATCCCCCTTTCCCGCCGGGGTGCTGACCCCCCTT	Design primers
695454	TGCGGCCACTGGTGCTGCGGTCATTGGTGCGGTGGTCACTGGTGC	Design primers
707170	GACAACGCTGCCTACAACGCTGTCTACAACGCTGTC	Design primers
720608	CCCGGCCCGACGCCCGGGCCGGCGCCCGGCCCGACG	Design primers
725077	TCGCGATCGTCGTGATCGCCGTTGTCGTGATCGCCCTCGTCGTCA	Design primers
726532	CTGCCTTCCGTCGGCCTTCCGTCGGCCTTCAGT	Design primers
728036	CCCGGTCCCCCGGTGCACCGGTCC	Design primers
731518	GACCAGGCGGATCAGGCGGACCGGGCGGATCAGGCG	Design primers
737274	GTGCTCCTTGATGCTGCTTGATGCTGCTTG	Design primers
742317	CAGCAGTCTCAACCCAGAAGCCTCAACCTCGCAGTCTCAACC	Design primers
755713	CCGGTCTCGCCGATCTCGCCGGTCTCG	Design primers
759686	AAGCCGTGGAGCATGCCCTGGAGCATGCCCTGGAGCAAGCCCGGGAGC	Design primers
761118	GTTCCGGCAGCAGTTCCGGCGCCAGTTCCGACAGCG	Design primers
766202	GGTGCCGGTGGTACCGGTGGTACCGGT	Design primers
767284	GTCGGCAC-CTCGGCAC-CTCGGCAC	Design primers
772410	CTCAGCACG-CTCAGCACG-CTCAGAACG	Design primers
772734	GGGGAGACGGGTGAGACGGGTGAGACG	Design primers
775504	CAGGATCACAA-TCGGATCACAA-TCGGATCACAA	Design primers
776859	TATCCGGCAC-CAACCGGCAC-CAACCGGCAC-CAACCGGCAC	Design primers
780145	GCTCCCGGTGCTCCGGGTGCCCCCGGT	Design primers
780217	CCGGCTGCCCCGGCCGCTGCGGCTCCGGCTGCTCCTGCCGCTGCGGCTCCGGCTGCTCCTGCCGCCGCTGCT	Design primers
780465	CGGAGCCCCGGCTGCCCCGGGTGCTCCGGCTGCCCCCGGCGCTCCGGCTGCCCCCGGCGCCCCGGCCGCGCC	Design primers
780625	GCCCCGGGAGCACCGATGGCTCCTGGCGCACCGATGGCTCCCGGTGCACCGATG	Design primers
798187	CCGGGGCCTATCCGGGCCTATCCGGGCCTA	Design primers
798295	GACAGTTACGCGCC-GACAGATACGCGCC-GGCAGATACGCGCC-GACAGATACGCGCC-GACAGATACGCGCC	Design primers
799512	TCTGTACC-TCCGTACC-TCCGTACC-TCCGTACC	Design primers
803309	CGGGTGGGGCAGGTGGGGCAGGCGGGGCAGGCGGGGCAGGCGGGGCAGGCGGGG	Design primers
822805	CGGCTC-CGGCTC-CGCCTC-CCGCTC	Design primers
825341	CCGGTGCTG-CCGGTGCTG-CCGGTGCAG	Design primers
833520	GTCACTGGGGCAG-CTCACTGGGGCAG-CTCACTGGGTCAG	Design primers
833560	TTGCCGGGTCAGC-TTGCCGGGTCAGC-TTGCCGGGTCAGT	Design primers
833640	GCACTGCATCCCCCACACTGCATCCCCCGCACCGCATGCCCC	Design primers
836293	AGGCTGCGCCGAAGAAGACCGCGGCGAAGAAGGCCGAGCCGAAGA	Design primers
836346	GCGAAGAAGGCTGCGCCGAAGAAAACTGCGGCGAAGAAGACTGCG	Design primers
836886	GCCACCGCAGCCGCCGCAGCCACCGCA	Design primers
838972	GTCAGGCCCCGGATCAGGCCCTGGATCAGGCTCCGG	Design primers
839175	GCCGGTGCCAGTGCCGGTGCCAGTGCCGGT	Design primers
846118	GTGCCCTTAGTGCCCTCAGTGCCCTTA	Design primers
849285	ACGGACACCGATGGTGAGCCGGACATCGACGGTGAGCCGGACATCGACGGTGAG	Design primers
851286	GGAGACATCGGGGGAGACGTCCGGGGAGGCTTCGGG	Design primers
851323	ACCGGGGGG-ACCGGGGGG-ACCGGGGAG	Design primers
855092	GATCGCGTCTGGTCGCGTGTGGTCGCGTGTGGTCACGTCTGATGGCGTCT	Design primers
873799	CGGCAGCGGCTGCCGCAGCGCCAG	Design primers
874583	GGCCGG-AGCCGG-AGCCGG-AGCCGG-AGCCGG	Design primers
932803	CGAGGTTGA-CGAGGTTGA-CGAGGTCGA	Design primers
938273	CCGTCTTTCCTACCCCTGTCTTTCCTGCCCCTGTCTTTCCTGTCC	Design primers
959306	CCAGCAGCAGTACGGCCAGCAGCAGTTCGGACAGCAGCAGTTTGG	Design primers
978652	ACAGTTCTGACGGTTCTGACAGTTCTG	Design primers
983748	TCCGGACACAGTCGGGGCACAGTCGGGGCACAG	Design primers
986601	TCC-GCC-CCC-GCC-GCC-GCC-ACC-GCC	Design primers
993584	TCGTCCGGGTCGTCCGGATCGTTCGGG	Design primers
1016503	GCCGGTCGCTGACGGTGGCTGACGGTCGCT	Design primers
1039360	ACGCCGACGCGGTCGCCGACGCTG	Design primers
1055479	AAGGACTGACCCGGACTGACATGAACTGAC	Design primers
1062346	GCCCCCGATTGGCCCCCGATAGCGCCCCGATTG	Design primers
1082045	CTCTGCGGCGGCTCCGCGTCGGCTCTGCGTCGG	Design primers
1105945	CCCACCCCTGA-TTCACCCCTGA-TTCACCCCTGA	Design primers
1113845	CCGGAGGAGACCCCGGTGGAGGAGACCCCAGTGGAGGAGGCCCCGGTGGAGGAGACCCCAGTGGAGGAGACTCCG	Design primers
1120452	GTGCCACCGA-CTGGCCGCGA-CCGGCACCGA-CTGGCAGCGA-CTGGCAGCGA-CTGGCAGCGA	Design primers
1139314	CCGACCGTACCGACCGAACCGACCGAA	Design primers
1140295	GACGCC-TACGCC-GACGCC-GTCGCC	Design primers
1168310	CGACCGGCACCGACTGGTACCGACCGGCACCGACCGGTATTGACCGGCAC	Design primers
1177889	CGTCCCTGGTCATCCCTGGTGATCCCTGGT	Design primers
1179596	GGGGAGGCGGGCCGACGTAGCCGGGTGGTGGACCGACGTAGCCGGGTGGCGGGCCGACGTAGCCGGGTGGCGGGCCGACGTATCCGGGTGGCGGGCCGGTGTAGCCGGGTGGCGGGCCGGTGTAGC	Design primers
1179723	GGGTGGTGGACCGGTGTAGCC-GGGTGGTGGACCGGTGTAGCC-GGGTGGTGGGCCGACGTAGCC	Design primers
1222863	CGGTGCGCAGATCGGTGAGCGGATCGGTGAGCAGAT	Design primers
1226026	CAG-CAG-CAA-CAG-CAG-CAG-CAA-CAG-CAG-CAG	Design primers
1238750	CTGCTGGCCATTCTGTTGGCCCTTCTGCTGCCCCTT	Design primers
1241149	GTTACCGGGCGCTGTCACCGGGCACTGTCACCGGGCGCG	Design primers
1261735	GGTCAGGATGTGACAGTCCGGATGTGACGGTCAGGATGTGAGGATCAGGATGTCACAGTCAGGATGTGAG	Design primers
1261826	GGAGGAACAGG-GGAGGGACGGG-GGAGGGACGGG-GGAGGGACGGG	Design primers
1261876	CGGGGGAGGG-ACGGGGAGGG-ACGGGGAGGG	Design primers
1283616	CTGGCCCGACGCCTGGCCCGGCACCTGGCCCGGTGC	Design primers
1291941	GGCCGGGCCACTTCCGCGCGCGG-CGCTGTGTCACTTCCGCGCGCGG-CGCTGTGTCACTTCCGCGCGCGG-CGCTGTGTCACTTCCGCGCGCGG-CGCTGTGTCACTTCCGCGCGCGG	Design primers
1292983	GATCTCCACAGGAATCTCCACCGGGATCTCCACCGGAATCTCCACCGGGATCTCGACACG	Design primers
1298878	GCCGTCGACGTCGCCTTCGCCGAC	Design primers
1316874	CCCGTCGGC-ACCGTCGGC-ACCGTCGGC	Design primers
1342397	CGGCCGAGGCCGTGGCCGCCGCCG	Design primers
1342449	CCCGTTCCGCCCTGTTCTGCCCCGTTTTGC	Design primers
1346952	CTGGCGCTGACCCGCGCTGAGTTGCGCTGA	Design primers
1347550	CTGCCGACCTGCGGACCCGCCGAC	Design primers
1364480	GGCGTCGGCGACGGCGCCGGCGTG	Design primers
1370518	GGTGCCGGTACCGGTGGCAGTGCCGGTGGC	Design primers
1371962	CGAGGGGATGAGGAC-CGTGGGGATAAGCAC-TGTGGGGATGAGCAC-CGTGGGGATGAGCAC-CGTGGGGATGAGCAC	Design primers
1374965	TCGGTATCA-GCGGTATCA-GCGGTATCA	Design primers
1379657	GATCGTGTCGGAGATCGCGTCGCAGATCTTGTCGGG	Design primers
1382836	TCCGTACGG-TCCGTACGG-TCCGTCCGG	Design primers
1400348	GGTCGGGGGTCGGGCCGGGGGTGGGGTCAGGGGTGG	Design primers
1403836	CGGCGTCCC-CGGCGTCCC-CGGCGTTCC	Design primers
1413397	TTTTCCCTG-CTTTCCCTG-CTTTCCCTG	Design primers
1428777	CGGTGTCAGTCTCGGTGGCAGGCTCGGTGTCCATCTCGGTGGCAGTCT	Design primers
1432996	TCTGGTTCTGTCGTGCCTGATTCTGTTGTGCCTGGTTCTCTCGTG	Design primers
1449734	GTTCTCCTGAATTCTGCTGAGTTCTGCTGAGTTCTGCTGAGTTCTACTGGGTTCTACTGGGTTCTCGTGG	Design primers
1457625	CTGGCCCTGGTCCGGGCACTGGTCCGGGCACTGGTC	Design primers
1459154	TCTCCTGCTGGTGTCCTGTTGGTGCCCTGCTGGTGTCCTGCTCG	Design primers
1460338	CGGGCACAGG-CAGGCTCAAG-CAGGCTCAAG-CAGGCTCCAG-CAGGCTCAGG-CAGACTCAGG	Design primers
1463074	CCGCCAAGAAGACAGCGAAGAAGACCGCCGCGAAGA	Design primers
1463111	AACTGCGGCAAAGAAGACCGCGGCAAAGAAAACTGCCGCGAAGAAGACTGCGGCGAAGAA	Design primers
1463343	GACGATGTGGACGATGTTGACGACGTG	Design primers
1475365	GCCGTGACC-TCCACGACC-TCCACGACC-TCCACGACC-GCCACGACC-GCCACGACC	Design primers
1502739	TCGGAGTAGCTGCCGAGTAGCTGCGGAGTAGCT	Design primers
1513744	GTCGTTGTCGTGCTCGTTGTCGGT	Design primers
1513881	GTGCCCCACGCTGTGACGCACGCTCTGCCCCGCGCTGTGCTCCACCCT	Design primers
1516753	CGGTCACCGCCACCGCGGTTGCCGCCACCCCGGTTAGCGCCACGG	Design primers
1519668	GGCCGTTGACTGGTAGTTGACTAGACGTTGACT	Design primers
1522100	ACCAGTGGACGACCAGTAGACGACGAGCGGACG	Design primers
1525689	CTCAGTGGCTGATGCTCAGAGCCTGATGCTCAGTGCCTGATC	Design primers
1527331	AGTCACACAAGTCACACTAATCACACA	Design primers
1542095	CTGCGCAGCCTCCCGCACAGCAGCCTCCCGCACAGCAGCCTCCCG	Design primers
1543228	CCGGATTGA-CCGGATTGA-CCGGATTAA	Design primers
1543524	CCAGGCAAAGCAGGCAAACCAGGCAGA	Design primers
1546318	GCGGTGCGG-GTGGTGCGG-GTGGTGCGG-GTGGTGCGG	Design primers
1546556	CCCGCTGTCCGACTCGCTGCCCGACCCGCTGCCCGA	Design primers
1550207	TGCTGCCGTTCCTGCCGTTGCTGGCGT	Design primers
1550937	CCACCCCGGATCCTGCCCCGGATCCCGGCCCGGATC	Design primers
1582326	CCCGACTGTCCCGACCGTCCCGACCGT	Design primers
1584642	GAAGCCGCCCTGGTCCGGGTAGAAGCTGCCCTGGTCCGGATAGAAGCCGCCCTGCTGTGCGTA	Design primers
1585444	CCATAACCCTGG-CTGTAACCCTGG-CTGTAACCCTGG-CTGTAACCCTGG	Design primers
1599688	CACGGCGGGAC-CACGGCGGGAC-CACGACGGAAC-CACGGCGGGAT	Design primers
1603463	GGCAGTGATGGCGGTGATAGCAGTGAT	Design primers
1612150	CCGCCGTCGCGCCCACCGTCACGCCCACTGTCGCGC	Design primers
1614351	CGCCGCGATGGTCGCAGCGATCGTCGCCGCGGTGGT	Design primers
1618607	CCCGACGCAGTCCTGACCCAGTCCTGACCCAGT	Design primers
1619489	GGCATGCCCGGCATACCCGGCATACCC	Design primers
1623774	TCGGGTTCCGGTTCGGGCTCAGGT	Design primers
1623861	GGCTCGGGTTCGGGCTCGGGCTCG	Design primers
1649908	GTCCTCGGCGACCTCGGCGACCTCGGC	Design primers
1654362	CCGGTCAGTGC-CGCGCCAGTGC-CGCGCCAGTGC-CGCGCCAGTGC-CGCGCTAGTGC-CGCGCCAGTGC	Design primers
1660558	CGCCGGTGCCGGCGCCCGCGCCTGGGCCGG	Design primers
1670803	GCGTCCTAG-GCGTCCTAG-TCGTCCTAG-GCGACCTAG-ACGTCCTAG	Design primers
1678576	CCCGGCTCTGTCCCTGCCCTGTCCCTGCCCTGT	Design primers
1678610	CCCCGGCCC-ACCCGGCCC-ACCCGGCCC-ACCCGGCCC	Design primers
1684090	CCGGCGCCGACGCCGGCACCGGCA	Design primers
1684765	AGTTCCCCCGACAGTTCCCCTGACAGTTCCCGGGAC	Design primers
1690015	CGTCCGCTG-CGTCCGCTG-CGTCCGCCG	Design primers
1730401	TCCGGCACAGTCGCCGGCGCAGTCGCCGGCACAGTCTCCGGCACAGTC	Design primers
1736227	CTCTGGTTG-TTCTGGTTG-TTCTGGTTG	Design primers
1736255	CCCGGTTGT-CCCGGTTGT-CCCGGTTGT	Design primers
1736332	GTGCGGTCGGTGCGATCGGTGCGGTCG	Design primers
1736488	CGGTTGCGG-CGGTTGCGG-CGGTTACGG-CGGTTACGG	Design primers
1736667	CCCCGTCGACTGCCCGGTCGGCTGCTCCGTCGGCTG	Design primers
1741408	GCCCGGCATGTT-CTCCGGCATGTT-CTCCGGCATGTT	Design primers
1746992	CGGATGTGTCAGCAGCGT-CGGCAGCGTCAGCAGCGT-CGGCAGCGTCAGCAGCGT-CGGCAGCGTCAGCAGCGT	Design primers
1755098	GCCTCGCCCTCTGCCTCGCCCTCAGCATCGCCGTCT	Design primers
1757752	GTCTCGTCTGTGGTGTTGTCTGTGGTCTCGTCGGTC	Design primers
1762941	CCACCACAACGGCGGCCACGACAACGACGGCCACCACTTCCGCGG	Design primers
1779831	ATCAGGCAGGGAAGGTCAGGCGGGGAAGGTCAGGCGGGGAAG	Design primers
1793883	CCGGGCCACTGCCGGTCCACTGCCAGTCCACTGCCAGTCCACTG	Design primers
1795743	CGGTCCGCCGCGATCCCCCGCGACCCGCCG	Design primers
1817728	ACGGAGACCACGGGGACCACGGGGACC	Design primers
1819935	GACCCCTGACACCCCTGATACCCCTGACACCCCTGA	Design primers
1845070	CCAGGTCACCGCCCCGGTCACCGTCCCGGTCACCAC	Design primers
1847614	CGCCGCCGTCGCCGCCACCGCTGC	Design primers
1864429	CCGGCG-CCGACG-CCGGTG-CCGGTG-CCGGTG-CCGGTG-CCGGTG-CCGGTG-CCGGTG	Design primers
1891557	CCA-CCA-CCA-GCA-CCA-CCA-CCA-GCA	Design primers
1914733	GCGGCCTCGGTGTCCTCGGTGTCCTCGGTGTCCTCGGTGTCCTCGGTGTCATCG	Design primers
1914836	CCTCGGCGTCATCGGCGTCATCGGCGT	Design primers
1915374	GTACTGAGGTGAACTGACGTGAACTCAGGT	Design primers
1918637	GCCACAGCT-GCCACAGCT-GCCAAAGCT	Design primers
1927863	GTACGCCCAGCAGGGTTACCCTCAGCAGGGCTACTACCAGCAGGG	Design primers
1932192	ACGCACTCA-ACACACTCA-GCGCACTCA-GCGCACTCA-GCGCACTCA	Design primers
1934979	TCCGTTGTTTCCGTTATTTCCGTTGTT	Design primers
1942928	GCCGGCGTCGGCGCAGGCGCGGGC	Design primers
1949643	GTCCACGGC-CTCCACGGC-CTCCACGGC	Design primers
1968617	TCCGACTCCTCGCCCGACTCTTCGCCCGACTCCTCC	Design primers
1968682	CTCCTCTGC-GTCCGTTGC-GTCCTCTGC-GTCCGCTGC-GTCCGCTGC-GTCCGCTGC	Design primers
1972159	CCCAGCATCCCCTGCATCCCCGGCATCCCCGGCATC	Design primers
1998265	CACATCCGGCAGATCCGGCAGATCCGG	Design primers
1999454	GTGCCCGTC-CTGCCCGTC-CTGCCCGTC	Design primers
2003297	CCCTCCGGGCACTCCGGGCCCTCCGGC	Design primers
2009803	GGCGGACGGGCCGGACGGGTCGGACGG	Design primers
2020842	GTGTCGTCT-GTGTCGCCT-GTGTCGCCT-GTGTCGTCT	Design primers
2020879	CCTCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA-CATCGTCCA	Design primers
2032921	GTCCAGAGTGGTCGAGGGTGGTCGAGGGTG	Design primers
2035186	CGTCCGCATCCGCGTCCCCGTCCC	Design primers
2054448	GACCGAGAAGACTGAGAACACCGAGAA	Design primers
2073889	CGGACAGGC-AGGACAGGC-AGGACAGGC-AGGACAGGC	Design primers
2081579	CGACCCCACCTCCCGACCCCACCTCTGGACCCCTCCTCC	Design primers
2158249	GCGAAGGCTGGGAAGGCTGCGAAGGCT	Design primers
2166515	CACAACGCGTACACCGGAATACGGTGTAACGCATACACCGGAATACGGTGTAACGCATACACCGGAATACGG	Design primers
2193684	CGACGACGACGCCGGCGAAGACGA	Design primers
2197714	AGCGCCCGTGAGCTCCAGTGAGCTCCCGTC	Design primers
2212711	CGGTCAGCAGCAGTACGGCCAGCAGCAGTTCGGCCAGTCGCAGTA	Design primers
2216192	GTGTCAGTCCCGGGTTGTCAGTCCCGCGTTGTCAGTCCCGCG	Design primers
2218234	CGTCACACAAACTGGGCTGCCCCGATGTCTCGCAACCTGCGCTGCCCCGATGTCTCGCAACCTGCGCTGCCCCGA	Design primers
2218752	ATCCCAGCACGGCCCAGCACGGCCCAGCACGGCCCAGCACATCCCCGCAC	Design primers
2222785	AGGACGCCACGGCGGACGCCAGGGAGGACGCCAGGAAGGACACCACGG	Design primers
2224642	CGCCGCCGCCGCCACCGCCGCCGC	Design primers
2233271	CGTCATCCAC-CGGCGTCCAC-CGGCGTCCAC-CGGCGTCCAC	Design primers
2241412	TGCTCGCTG-TGCTCGCTG-TGCTCTCTG	Design primers
2244328	CCCAGACGCCACAGACGCCACAGACGC	Design primers
2247013	CGCAGCGTCCGACGCTGTGTCCGACGCAGCGTCCGA	Design primers
2275797	CGGGACCGGCACGAGACCAGCACAGGACCGGCACGAGACCAGCA	Design primers
2275881	GCTTCCCGGA-GATTCCCAGA-GATTCCCAGA-GATTCCCGGA	Design primers
2288230	CGGCGT-TGGCGT-TGGCGT-TGGCGT-TGGCGT	Design primers
2289091	CGCGTCGTCCATGCGGCGTGCATGCGAGGTCCATGCGGCGTCCATGCGGCGTCCATGCGGCGTCCATGCGGCGTCCATGCAGCGTCCATGCGGCGTCCATGCGGCGTGCT	Design primers
2290763	ACGCCCTGCA-CCAACCTGCA-CCGACCTGCA-CCGACCTACA-CCGACCTACA-CCGACCTGCA	Design primers
2290824	CAACCTACTGCGACATACTGCGACCTACTGCGACCTACTG	Design primers
2310927	CGGCCTTCTCGGCATTCTCGGCTTTCT	Design primers
2315628	CCGCGTCAGTCCACCGGTGTCAGTCCACCGGTGTCAGTCCAC	Design primers
2322787	GCATCCGTGTCTGCGTCCGTGACTGCGTCCGTGACT	Design primers
2323276	TCGGCGACCTCAGCGACCTCAGCGACC	Design primers
2327784	ACCACAGTGCCCACAGTGTCCACAGCGTCCACAGTGTCCCCAGTGCCCACAGTC	Design primers
2336051	GCGCAGCAGTGTGCGCAGCGCTGTGCTCAGCGGTGTGCGCAGCCGTGC	Design primers
2356054	TGCGTCAGCG-GCCGTCAGCG-GCCGTCAGCG-GCCGTCAGCG	Design primers
2368499	ACCAGCGGCACCAGCGGTGCCAGCGGCACCAGCGGG	Design primers
2370832	GCGGTCGTCCGGGCGGTCGACCGAGTGGTGGTCCGG	Design primers
2378640	GCCGTCTTCTTGGCAGCTGCCTTCTTCGCAGTGGTCTTCTTCGCA	Design primers
2378701	TGGCCTTCTTCGCGGTGGCCTTCTTGGCCCCGGTCTTCTTCGCCG	Design primers
2383667	CACCGGCGCTGACACCGGCACAGACACCGGCACAGA	Design primers
2388388	GATCACGACCCAGCGTTCACGGCCCAGCGTTCACGGCCCAGC	Design primers
2389991	GATCTGCGGCCAGATCAGCAGCCAGATCTGCGGCCG	Design primers
2401231	GCGCCA-GCGCCA-GCGACA-GCGACA-GCGACA-GCGCCG	Design primers
2403001	GACGACCTTGACGACCTGGACAACCTT	Design primers
2407479	ACCGGACTTCCGGACTTCCGGTCTTCCGGACTTCCGGGCTTCCGGGCT	Design primers
2407542	TTCCGCGCTTCCGAGCTTCCACGCTTCCGGGC	Design primers
2417776	CGTCGGCAC-TGTCGGCAC-TGTCGGCAC-CGTCGGCAC	Design primers
2418030	GGGCAGCGTCACGACAGCGTCACGACAGCGTCA	Design primers
2425655	GTCGGGGAC-ACCCGGGAC-ACCGGGGAC-ACCGGGGAC-ACCGGGGAC-ACCGGGGAC-ACCGGGGAC-ACCGGGGAC	Design primers
2433777	ACCAATTGCTGCA-GGCAATTGCTGCA-GGCAATTGCTGCA	Design primers
2433989	CGACCACCACGTCCACCACGACCACCC	Design primers
2435678	ACACAGCGAACGCAGCGAACACAGGGAACGCAGCGAACACAGGGA	Design primers
2437193	GCGGGCAGC-AAGGTCAGC-AAGGTCAGC-AAGGTCAGC-AAGGTCAGC-AAGGTCAGC-AAGGTCAGC-AAGGTCAGC	Design primers
2437428	CCAGTCCACCCAGTCCAACCAGTCCTC	Design primers
2437456	TGAAACCAGGCACG-TGAAACCAGGCACG-TGAAACCAGGCACG-TGAAACCAGGCATG	Design primers
2456209	CGGCACCAGCACCCGCACCGGCACCCGCAC	Design primers
2456636	CACCGGACCGTCCGCCGGACCGTTCACCGGGCCGGC	Design primers
2472657	CCGGCGACTCCAGCGACTCCAGCGACT	Design primers
2473357	CTCCACCGGAGTCGCCGCCGGAGTCGCCGCCGGAGT	Design primers
2480293	CGGCGA-CGGCGA-CGGGGA-CGGTGA-CGGCGG	Design primers
2491101	CCTCCGGTTCCACCTCAGCCCGTTCCACCTCAGCCCGTTCCACCT	Design primers
2491147	AGCCGGCTCAACGTC-AGCCGGCTCAACGTC-AGCCTGTTCAACCTC-AGCCGGCTCAACGTC-AGCCTGTTCAACCTC-AGCCGGCTCAACCTC-AGCCGGTTCAACCTC-AGCCGGTCCAGCGTC	Design primers
2494481	CCGATCCACTGTCTGTTCCACTGTCTGTTCCACTGT	Design primers
2498840	TCCTACCGCCGCCGGCAGGTCAT-GGTCACCGCCGCCGGCAGGTCAT-GGTCACCGCCGCCGGCAGGTCAT-GGTCACCGCCGCCGGCAGGTCAT-GGTCACCGCCGCCGGCAGGTCAT	Design primers
2505137	GTCTCAGCGTCGGTCTCCACGTCGGTCTCCACGTCGGTCTCAGCGTCCGTCTCAGTGTCG	Design primers
2524442	TTTCTACGGCAGTTCTACGGCAGTTCTACGACATTCCTACGACA	Design primers
2527375	GTGCGGGTGGTCATGCGAGTGGTCATGCGGGTGGCC	Design primers
2530145	ACTTTCCGGGAAAGTTCCGGGAACTTTCCGGCT	Design primers
2548115	TCCTCCCGG-GCCTCCCGG-GCCTCCCGG	Design primers
2551731	CTCGGTGGCGGCCTCGGTGGCGGTCACGGTGGAGGCCGCGGTGGCTGC	Design primers
2553606	GGTCGGACGGCGTCGGACGTCGTCGAACGG	Design primers
2557243	TTCGGCGGC-ATCGGCGGC-ATCGGCGGC	Design primers
2559005	GCACTTGCTGCGGCACTTGCTGCACCACCTGCTGCG	Design primers
2559944	CCGGCACCCGCACCGTCACCTGCA	Design primers
2576316	CTCGCGATCGTCGCGATCCTCGTGATC	Design primers
2584636	TGCCACTCACTGCCACAGACTGCCGCTCAC	Design primers
2596069	GGCTTTGTCCGT-GCCTTTGTCCGT-GGCATTGTCTGT-GGCATTGTCTGT-GGCATTGTCTGT	Design primers
2598503	GAGTCGTCTGTGTCGTCTGTGTCGTCT	Design primers
2603793	GGAACCCTGCCCGGCCGGCGTCAGCAACCCTGCCCGGCCGATGTCAGCAACCCTGCCCGACCGATGTCAGCAACCCTGCCCGGCCGATGTCA	Design primers
2603949	GTCTGGGGGGGACTGTCAGGGGCGGACTGTCAGGGGCGGACT	Design primers
2616234	GATACCGGGGATACAGGGGATACCGGG	Design primers
2616328	GTCGCCACACCTCTCATCACACCTCACCCCACACCTCTCATCGCACCTGTCGGCACACCTGTCGGCACACCT	Design primers
2622587	TGTCACAACTCCCCGTCACAGCTCCCCGTCACAACTCCT	Design primers
2625497	CAAGATCAGCAAGGTCAGCGAGATCAGCGAGATCAG	Design primers
2625534	CAGGCCAGC-CAGGCCAGC-CAGGCCAGC-CAGGCCAGC	Design primers
2625575	CGGCAAGGTCGGCAAGGCCAGCAAGGTCGGCAAGGCCAGCAAGGT	Design primers
2627732	GGTCTTCGTCCGGGTCTGCGGCCGGGTCTGCGGCCG	Design primers
2627877	GACGACGGGCGAGGCGACGGGCGAGACAATGGGCGA	Design primers
2630277	GACAGGACGCTGGGCAGGACGCGGGGCAGGACGCTG	Design primers
2640377	CGGACTCGGTGGTGGATTCGGTGGTGGACTCGGTGG	Design primers
2640911	CCGACGCCCGCAGCACGTCCGACGCCCGCAGCACATCCGGCACCCGCAGCACAT	Design primers
2643736	CCGGTACGTGCAGGAACGTGCAGGAACGTGCCGGTCCGCG	Design primers
2646874	TGTCGG-TGACGG-TGACGG-TGGCGG	Design primers
2649914	CGCCGGGA-TGCCGGGA-TGCCGGGA	Design primers
2649986	CCTCAGCAGCGCCAGCGGCGTCAGCAGCGTCAGCAGCGTCAGCAGCGTCAGCGT	Design primers
2650230	GAGCGTCAGCGTGAGCATGACCGT	Design primers
2651495	CAGGGACTGTTTCTGGGACTGTTTCTGGGACTATTT	Design primers
2656102	GCCGGCCGG-GCCGGCCGG-GCCGGCCAG	Design primers
2657114	CGGGATCGA-CAGGGTCGA-CGGGCTCGA-CGGGCTCGA-CGGGCTCGA-CGGGCTCGA	Design primers
2661945	GGCGGGGGCGGCGGCGTGGGCGGC	Design primers
2666302	CGGCGGCCTCGGCGTCCTCGGCGTCCT	Design primers
2671317	AAAGGATCA-GAAGGATCA-GAAGGATCA	Design primers
2671612	GGCGGGGCTGCTCCG-GGTGAGGCTGCTCCG-GGTGAGGATGCTCCG-GGTGGGGATGCTCCG-GGTGGGGCTGCTCCG	Design primers
2674815	GAGCTGCTA-GAGCTGCTA-CAGCTGCTA	Design primers
2680419	CGGTGGCGGGGTCGGTGGCGGGCTCGTTGGCGGGCT	Design primers
2707853	CCGTAGCGT-CTGCAGCGT-CCGCAGCGT-CTGCAGCGC-CTGCAGCGC-CTGCAGCGT	Design primers
2713173	AGCGGAAACACCA-CGCAGAAACACCA-CGCAGAAACACCA-CGCAGAAACACCA	Design primers
2719156	TGGTGCAGCACTGATGCAGTACTAGTGCAGTAC	Design primers
2724548	GCGTCCGCCGCGTCCACCGCGTCCGCC	Design primers
2728084	CGGCCACC-AGGCCACC-AGGCCACC-AGGCCACC	Design primers
2732945	CGCCGAACTCGCCGAAGTCGCCGAAGT	Design primers
2732973	ACTGTCCGGATTCCTGCCCGGATTCCTGCCCGGATT	Design primers
2733603	CATCCGCCCCGTCGTCCGCCCCGTCATCCACTCCGT	Design primers
2737805	TGGCGTCCAACA-CCGCGTCCAACA-CCGCGTCCAACA	Design primers
Search your sequence for microsatellites

This database allows retrieval of precomputed tandem repeats from the selected genome. It also allows to easily design primers for amplification of a DNA fragment containing the tandem repeat. The primers may be used for PCR simulation with a specific genome or with all genomes within the selected genera.

Info

Percentaje of mismatches allowed within the tandem repeats: 0 | 0.1 | 0.2

Position

Sequence

30382

CGGTGCCGACGGGGCCGACGGTGCCGA